Gene Information

Name : SLGD_00842 (SLGD_00842)
Accession : YP_003471117.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : heme ABC type transporter HtsABC, permease HtsC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 905007 - 905972 bp
Length : 966 bp
Strand : +
Note : -

DNA sequence : 
TTGACTAAAAAAGTACTAATTCGACGTTATACTTTTGTGCTGATTGTGCTATTGATTGCATTTGTCAGTAGCTTATGTGT
CGGTTCTACTATGTTTTCACCCATTTATGCGTTAAAACATATGTTCACTTTTGATGACTTTATTTTAAATGAATATCGTA
TTCCAAGAACATTATTAGGTTTACTCGTTGGCTGCAGTCTAGCGATTTCAGGTGCGATAATTCAAGGTGTAGTTAGAAAT
CCGTTAGCATCTCCAGATGTTATCGGTATCTCTAAAGGTGCAAGTTTAGCTGCGGTTATACTTATAATGGTTTTTCCATC
AGCACCCTTGTTTTTATTACCAGTGGGTTCATTTATCGGTGCGCTATGTATTAGTTTGATTTTGTCTATTCTCATATCTA
GATTTAATGTAAAAGGGTCTAGTTTAGCACTTATTGGATTAGCAATTGGTGCGATTTGTACAGCAATTGTACAGTTTCTA
CTAATACGAAATCCTATGGATGCAAATAATGCTTTATTATGGCTAACTGGTAGCTTATATGGGCATACGATTGAAAATGT
ATTGGCGATTTTTCCATGGTTTATCATTGCAATTCCACTGATTTTAATTTTAAGTTATCAACTTGATATTTTAAATTTGG
GAGATCAGTTGGCAATCGCATTAGGTGCCAAAGTAAAAGGTTTAAAAATGACATTACTGATATTATCTGTAGTTCTTGCA
GGTGCATCGATTTCAGTAGTGGGTGGTATTAGTTTTCTAGGATTAATTGCACCGCATATTGCGCGTTCAATTGTCGGACA
ACGCTATTTGCATATTGTTTTGATGTCTGGTCTTATAGGTGCAGCACTTATTTTATTCAGTGATGCTTTAGCCAGAGGCA
TACATCCACCTTTAGATATCCCAGTAGGTGTCATAATAGCAATTATTGGCGTGCCATATTTCCTATTTTTATTGAAAAAA
TTATAA

Protein sequence : 
MTKKVLIRRYTFVLIVLLIAFVSSLCVGSTMFSPIYALKHMFTFDDFILNEYRIPRTLLGLLVGCSLAISGAIIQGVVRN
PLASPDVIGISKGASLAAVILIMVFPSAPLFLLPVGSFIGALCISLILSILISRFNVKGSSLALIGLAIGAICTAIVQFL
LIRNPMDANNALLWLTGSLYGHTIENVLAIFPWFIIAIPLILILSYQLDILNLGDQLAIALGAKVKGLKMTLLILSVVLA
GASISVVGGISFLGLIAPHIARSIVGQRYLHIVLMSGLIGAALILFSDALARGIHPPLDIPVGVIIAIIGVPYFLFLLKK
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 6e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_00842 YP_003471117.1 heme ABC type transporter HtsABC, permease HtsC BAC0163 Protein 4e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_00842 YP_003471117.1 heme ABC type transporter HtsABC, permease HtsC VFG1043 Protein 3e-36 44