Gene Information

Name : SLGD_00631 (SLGD_00631)
Accession : YP_003470906.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : urease alpha subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 691287 - 693002 bp
Length : 1716 bp
Strand : -
Note : -

DNA sequence :
ATGAGCTTTAAAATGACGCAATCTCAATATACAAGCTTGTACGGACCAACTGTAGGTGACTCAGTACGACTTGGTGATAC
TAATTTATTTGCACAAGTTGAAAAAGATTATGCCAATTATGGTGATGAAGCGACATTTGGTGGCGGTAAATCTATCCGTG
ATGGCATGGCACAAAACCCAAACGTCACTCGAGATGATCGCAAAGTGGCTGATTTAGTGCTAACGAACGCCCTTATCATT
GATTACGATAAAGTTGTAAAAGCAGATATTGGCGTTAAAAATGGCTATATTATGGGTATTGGTAAAGCCGGTAACCCTGA
TATTATGGACAATGTAGACATTATTATTGGTGCAACCACAGATATCATCGCTGCTGAAGGTAAAATCGTAACTGCAGGTG
GCATTGATACACACGTGCACTTTATTAATCCTGAACAAGCTGAAGTTGCACTTGAAAGTGGTATTACAACACACATTGGT
GGTGGCACAGGTGCTTCTGAAGGAACGAAAGCAACAACAGTGACACCAGGTCCTTGGCATATCCATCGCATGTTAGAAGT
AGCTGAAGCGCTACCAATTAATGTCGGGTTCACTGGCAAAGGTCAAGCAGTCAATCATACAGCTTTAATTGAACAAATAC
ATGCTGGTGCCATTGGCCTCAAAGTACATGAAGACTGGGGAGCAACACCTTCAGCATTGCGTCACGCATTAGATGTTGCA
GATGAATTTGATGTACAAATTGCTTTACATGCTGACACCTTAAATGAAGCTGGCTTCATGGAAGATACAATGGCAGCCGT
TAAAGATCGTGTACTTCATATGTACCATACTGAAGGTGCTGGTGGTGGACATGCACCCGACTTAATCAAATCCGCATCAT
ATCCAAACATTTTACCGTCCTCTACGAATCCTACATTACCATATACACAAAATACAGTTGATGAACATTTAGACATGGTC
ATGATTACACACCATTTAAACGCTTCAATTCCAGAAGACATTGCATTTGCTGATTCCCGTATTAGAAAAGAAACCATTGC
TGCCGAAGATGTCCTTCAAGACATGGGTGTCTTCAGTATGATTAGCTCTGATTCTCAAGCGATGGGACGTGTGGGCGAAG
TGATTATACGAACTTGGCAAGTCGCACATCGTATGAAAGAACAACGCGGTGGTTTAGAAGGCGATACAGAATATAACGAC
AATCATCGTATTAAACGTTATATCGCAAAATACACAATTAACCCTGCCATTACACATGGTATTTCTGATTATGTGGGTTC
AATCGAAAGTGGAAAATTAGCTGATTTAGTCATGTGGGATCCTATCTTCTTTGGCGTTAAACCTGAGCTTGTAGTTAAAG
GTGGTTTAATCAATTCTGCTGTCAACGGTGATGCCAATGGTTCTATACCAACATCAGAACCTCAAAAATATCGTAAAATG
TATGGCCAATATGGTACAAACATACAACATACAGCCATTACATTTGTTTCTACCACGGCTTATGAAAATGGTATTTATAA
TCTGCTTAACTTGAAACGTATGGTACGTCCAGTACATGGTATACGTAACTTATCCAAAAAAGATATGAAGCATAACCACG
CAACACCAAAATTAGACGTAGATCCACAAACATACGAAGTATTTGTTGACGGTGAAAAAATTACAAGTGAAGCTGCGACT
GAATTACCACTAACTCAAAGATACTTCTTATTCTAG

Protein sequence :
MSFKMTQSQYTSLYGPTVGDSVRLGDTNLFAQVEKDYANYGDEATFGGGKSIRDGMAQNPNVTRDDRKVADLVLTNALII
DYDKVVKADIGVKNGYIMGIGKAGNPDIMDNVDIIIGATTDIIAAEGKIVTAGGIDTHVHFINPEQAEVALESGITTHIG
GGTGASEGTKATTVTPGPWHIHRMLEVAEALPINVGFTGKGQAVNHTALIEQIHAGAIGLKVHEDWGATPSALRHALDVA
DEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSASYPNILPSSTNPTLPYTQNTVDEHLDMV
MITHHLNASIPEDIAFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVIIRTWQVAHRMKEQRGGLEGDTEYND
NHRIKRYIAKYTINPAITHGISDYVGSIESGKLADLVMWDPIFFGVKPELVVKGGLINSAVNGDANGSIPTSEPQKYRKM
YGQYGTNIQHTAITFVSTTAYENGIYNLLNLKRMVRPVHGIRNLSKKDMKHNHATPKLDVDPQTYEVFVDGEKITSEAAT
ELPLTQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-170 64
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-172 64
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-172 64
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-172 64
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-167 62
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-167 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_00631 YP_003470906.1 urease alpha subunit VFG0270 Protein 7e-152 58