Gene Information

Name : SLGD_00479 (SLGD_00479)
Accession : YP_003470754.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.22
Position : 532716 - 534209 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAAATGTAAATATAAGAGATTTTATAGATGAAAAATATGATTTATTTATCAATGGAGAATTTCAAGCAAGTGATAG
TGGAGAAACATTAGACGTAACTAATCCAGCTAACGGAGAAACATTAGCACAAGTAGCTAAAGCCAATCAAGCAGATGTTG
ATAAAGCGGTTAAAGCAGCTCAGGATGCTTTTGACAGCTGGAGTAAAATTTCTAAAGAAGAACGAGCGGACTATTTATTA
GAAATTAGTCGTCGCATACTTGAAAAAAAAGAACATTTTGCGACTGTTGAGTCGTTACAAAACGGTAAACCGTACCGTGA
AACGTCTACGATTGATATTCCTCAAACAGCAAATCAGTATAAATATTTTGCAAGTGTGTTAACAACTGATGAAGGTAGTG
TTAATCAAATTGATGACAATACAATGAGTTTAGTTGTAAATGAACCCGTCGGCGTAGTTGGAGCAGTTGTCGCATGGAAC
TTCCCATTCCTATTATCTTCATGGAAACTCGCGCCAGCATTAGCTGCAGGTAATACCGTTGTCATTCAACCATCATCATC
TACACCGTTATCACTCATAGAACTTGCGAAAGTGTTCCAAGACGTATTACCGAAAGGTGTAGTTAACGTTGTAACTGGTA
AAGGTTCTGAATCTGGCGATGCCATCTTTAAACATGAAGGCGTGGATAAATTATCATTTACAGGTTCAACAGATGTTGGT
TATGGCGTAGCAAAAGCAGGTGCTGAACGTATTGTTCCTACTACTTTAGAACTTGGTGGTAAAAGTGCAAACATTATCTT
TGATGACGCAAATTTAGATCAAGTAGTTGAAGGTGTACAACTTGGAATTTTATTTAACCAAGGTGAAGTATGTAGTGCAG
GCTCACGTTTACTAGTACAGACTTCAATTTATGATAAAGTCATTCCTAAATTGAAAGAAGCTTTTGAAAATATCAAAGTT
GGCGATCCTTTCGATAAAGATATTAAAATGGGTGCTCAAACTGGGCCAGATCAAATAGAAAAAATTGAAAGCTATATTAA
AATTGCAGAAGAAGATAGCAGTGCAACTATCTTAACAGGTGGCCATCGTCTAACTGATAATGGTCGCGATAAAGGATATT
TCTTTGAACCTACAATCATTGAGTTAAAAGATAATAGTCATAAATTGGCACAAGAAGAAATTTTTGGACCAGTATTAGTT
GTAGAAAAATTTGAAGATGAAAATGAAGCGATTCAAATCGCTAATGACTCGGAATACGGTTTAGCTGGTGGTATCTTTAC
GACAAATCTCAACCGTGCTTTAAATGTCGCTAAAGCAATGAGAACAGGACGTATTTGGATTAATACGTATAACCAAATTC
CAGCCGGTGCGCCATTTGGTGGATATAAAAAATCCGGTATTGGTCGTGAAGTTTATAAAGATGCGATTAAAAACTATCAA
CAAGTTAAAAACATCTTTATCGATACAAGCAATCAAACGAAAGGTTTATATTAA

Protein sequence : 
MSNVNIRDFIDEKYDLFINGEFQASDSGETLDVTNPANGETLAQVAKANQADVDKAVKAAQDAFDSWSKISKEERADYLL
EISRRILEKKEHFATVESLQNGKPYRETSTIDIPQTANQYKYFASVLTTDEGSVNQIDDNTMSLVVNEPVGVVGAVVAWN
FPFLLSSWKLAPALAAGNTVVIQPSSSTPLSLIELAKVFQDVLPKGVVNVVTGKGSESGDAIFKHEGVDKLSFTGSTDVG
YGVAKAGAERIVPTTLELGGKSANIIFDDANLDQVVEGVQLGILFNQGEVCSAGSRLLVQTSIYDKVIPKLKEAFENIKV
GDPFDKDIKMGAQTGPDQIEKIESYIKIAEEDSSATILTGGHRLTDNGRDKGYFFEPTIIELKDNSHKLAQEEIFGPVLV
VEKFEDENEAIQIANDSEYGLAGGIFTTNLNRALNVAKAMRTGRIWINTYNQIPAGAPFGGYKKSGIGREVYKDAIKNYQ
QVKNIFIDTSNQTKGLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-91 45
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-93 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-93 44
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-93 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-93 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_00479 YP_003470754.1 aldehyde dehydrogenase VFG0082 Protein 2e-91 45