Gene Information

Name : SLGD_00475 (SLGD_00475)
Accession : YP_003470750.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Unknown
Product : IS605/IS200-like transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 528600 - 529082 bp
Length : 483 bp
Strand : -
Note : -

DNA sequence :
ATGTCATCCGACACAAACAGTTTAGCACATACAAAATGGAATTGTAAGTATCATATCGTCTTTGCTCCTAAATACAGAAG
ACAAGTGATATATGGAAAAATAAAAAAAGATATTGGAATGATTTTGCGTCAATTGTGCGAAAGAAAAGGCGTAGAGATAA
TTGAAGCAGAGGCATGTAAAGATCATATTCACATGATAGTTAGTATACCGCCAAAAATAGGTGTATCATCATTTGTTGGC
TATTTAAAAGGAAAAAGTAGTTTAATGATATTTGATAGACATGCCAACTTGAAATATAGATATGGAAATAGAAAGTTTTG
GTGCAAAGGATATTATGTAGATACTGTAGGTAGAAACAAAAAAGTAATTGAAAATTATATACGAAACCAATTACAAGAGG
ATATCGTTGCAGATCAAATCACAATGGAAGAATACCTAGATCCGTTTACAGGAGAAGAAATTAAAAAAAGAAAGAAAAAA
TAG

Protein sequence :
MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGMILRQLCERKGVEIIEAEACKDHIHMIVSIPPKIGVSSFVG
YLKGKSSLMIFDRHANLKYRYGNRKFWCKGYYVDTVGRNKKVIENYIRNQLQEDIVADQITMEEYLDPFTGEEIKKRKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 8e-57 76
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 7e-50 74
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 1e-39 65
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 2e-39 65
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-46 58