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Name : SLGD_00326 (SLGD_00326) Accession : YP_003470601.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Virulence Product : capsular polysaccharide synthesis enzyme Cap8D Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 340779 - 342578 bp Length : 1800 bp Strand : + Note : - DNA sequence : GTGAACAAATTAAATGCTCGAGTAAGGCTTTTTGCTTTAATTATAATAGACTCGTTGATTGTAGCATTTTCAGTTTTTAT TTGTTATAACATTTTGGAGCCTTTTTTCAAAGGATACGCCAATAAAATTCTAATTTTGACTTCAATATTGCTATTAATCG CGCATCATGTATTTGCTTATATTTTTAACTTATACCATCGTGCATGGGAGTATGCCAGTGTAAATGAATTATTAATCATA GTAGAGTCAGTGACTTGTTCTATTTTAGCTACAGTCATATTAGTTCCAGTATTTACGGGGCACCCACCGTTCTTTAGATT ATATCTTATTACATGGATGATGGTGTTAATATTAATCGGAGGTTCCCGTATTTCATGGAGAGTGACACGAAAATTTGTCG TTGGCAAACATCAAAAGAAAAAACCAACCCTTATTGTCGGGGCTGGACGAGGTGGTTCTTTACTTATTCGCCAAATGTTA AGAAGTCCTGAAATGGGGCTAGAACCGGTATTGGCAGTGGATGATGATCCTCAAAAAAGAAAACTCACCATAGCAGACGG TGTAAAAGTACAAGGGACAATTGATGATATCCCTAATTTAGTAAATAAATTCCGCATTAAGCGTATTATTATTGCTATTC CAACACTCAAGCCTAATCGCCTAAAAGAAATTAACGATATTTGTAATAGCACTGGCATAGAATTGTTTAAAATGCCTAGC ATTGAACAAGTATTAGTTGGTGAACTAGAAGTTAATCAATTAAAACGTGTAGAGGTAGAAGATTTACTTGGGCGTGAACC AGTTGAATTGGATATGGCTATGATTTCAAAAGAACTAACGCATAAAACGATAATGGTTACCGGTGCTGGTGGTTCGATTG GCTCTGAGATATGTAGACAAGTTTGTAAGTTTGAACCTGATTGTATTCTGTTATTAGGGCACGGCGAAAATAGTATTTAT CTTATTCATCAAGAATTAAATGCAATTTACAAAGATAAAATTAGAATTATTCCAATTATAGCCGATGTACAAAATCCAGA ACGCATTCAAGATGTGATGAATCGGTATAAGCCATATGCCGTATATCACGCTGCTGCGCATAAACACGTACCTTTAATGG AATACAATCCAATTGAAGCATTTAGAAATAACGTTTTAGGTACACGAAATGTCGCGATAGCTGCTAAAACTGCAGGGGTC AGAAAATTCGTCATGATTTCTACAGATAAAGCTGTAAATCCACCAAATGTGATGGGCGCGTCAAAACGTTTAGCTGAAAT GGTTGTTCAAAGTTTAAATGAAGAAAATAGTAAAACCGATTTCGTAGCTGTTCGTTTTGGTAATGTATTAGGTTCACGTG GTTCAGTAATCCCATTATTTAAAAAACAAATTGAAGCTGGTGGTCCAGTTACAGTAACACATCCTGATATGACGAGATAT TTCATGACGATTCCAGAGGCTTCAAGACTTGTGTTACAAGCTGGTGCCTTAGCACAAGGTGGAGAAATATTTGTTTTAGA TATGGGCGAACCTGTTAAGATTGTTGATTTAGCAAAAAATTTAATTAGATTAAGTGGAAAATCCGAAGATGATATTCAAA TTAAATTTACTGGTATTCGTCCAGGTGAAAAGATGTACGAAGAATTACTGAATGAAAATGAAATACATCCTGAGCAAGTT TATGAAAAGATTTATAGAGGCAAAGTAAGAAACTTTTCTAAAGACGAAGTAGAAGCAATCATCAATGATTTAGTGAAAGA TTTTAAGAAAGAAAAAATAATCAAAATTGCTAATGATTAG Protein sequence : MNKLNARVRLFALIIIDSLIVAFSVFICYNILEPFFKGYANKILILTSILLLIAHHVFAYIFNLYHRAWEYASVNELLII VESVTCSILATVILVPVFTGHPPFFRLYLITWMMVLILIGGSRISWRVTRKFVVGKHQKKKPTLIVGAGRGGSLLIRQML RSPEMGLEPVLAVDDDPQKRKLTIADGVKVQGTIDDIPNLVNKFRIKRIIIAIPTLKPNRLKEINDICNSTGIELFKMPS IEQVLVGELEVNQLKRVEVEDLLGREPVELDMAMISKELTHKTIMVTGAGGSIGSEICRQVCKFEPDCILLLGHGENSIY LIHQELNAIYKDKIRIIPIIADVQNPERIQDVMNRYKPYAVYHAAAHKHVPLMEYNPIEAFRNNVLGTRNVAIAAKTAGV RKFVMISTDKAVNPPNVMGASKRLAEMVVQSLNEENSKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPVTVTHPDMTRY FMTIPEASRLVLQAGALAQGGEIFVLDMGEPVKIVDLAKNLIRLSGKSEDDIQIKFTGIRPGEKMYEELLNENEIHPEQV YEKIYRGKVRNFSKDEVEAIINDLVKDFKKEKIIKIAND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 0.0 | 74 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 0.0 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SLGD_00326 | YP_003470601.1 | capsular polysaccharide synthesis enzyme Cap8D | VFG1300 | Protein | 0.0 | 72 |
| SLGD_00326 | YP_003470601.1 | capsular polysaccharide synthesis enzyme Cap8D | VFG0029 | Protein | 2e-71 | 42 |
