Gene Information

Name : SLGD_00325 (SLGD_00325)
Accession : YP_003470600.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme Cap5C
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG4464
EC number : 3.1.3.48
Position : 339977 - 340744 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGATTGATATACATAATCATATTTTGATTAATGTGGACGATGGTCCTAAAACTAAAGAAGATGCCATTACTTTATTAAC
TCAAGCGAAGAATGAAGGGGTTACAGAGATTGTTGCGACACCACATCACTTAAGTCCCCAATATGATAACAGTTATAGTC
AGGTTAAAGAAAGTTTAGAACAACTCTTAGATATGGATGAAGTCAAAGATTTAGGTATCAAGCTTTATCCAGGACAAGAA
ATAAGAATAACAGATCAAATACTGTCCTTATTACAAAAAGGAGATGCCATTGGATTAAATAACTCTAACTATTTATTAAT
AGAGTTGCCGTCAAATAGTGTTCCACACTATACAAAACGTCTTTTCTTTGATTTACAGTCGAATGGTTATATCCCCATCA
TTGCCCATCCAGAGAGGAATAAGGTCATCACCCAAGACTTAGATGTTTTATATGAACTTATAAATTCGGGTGCGTTCAGC
CAGCTTACTTCAGCCTCGTTAATGGGAAAACTTGGAAAAAAAGTGCAAAAATTGTCCATTCAAATGATTGAAAATAATTT
ATCCCATTTCATAGCTTCAGATGCACACCATGTCACCCAAAGACCTTTTATCATGAATAGTTTGTTTAGCAATAAAAATT
TACAAAAATATGAAGAAAACATAAAAAATTTTATGAATAATGCAAAATCTGTCATCAAAAATGAAAATATAGTAAAAAAA
CAACCACTTCAAGAATATAAGCATAAAAAATTGTTTGGTTTATTTTAA

Protein sequence : 
MIDIHNHILINVDDGPKTKEDAITLLTQAKNEGVTEIVATPHHLSPQYDNSYSQVKESLEQLLDMDEVKDLGIKLYPGQE
IRITDQILSLLQKGDAIGLNNSNYLLIELPSNSVPHYTKRLFFDLQSNGYIPIIAHPERNKVITQDLDVLYELINSGAFS
QLTSASLMGKLGKKVQKLSIQMIENNLSHFIASDAHHVTQRPFIMNSLFSNKNLQKYEENIKNFMNNAKSVIKNENIVKK
QPLQEYKHKKLFGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-73 56
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 9e-73 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_00325 YP_003470600.1 capsular polysaccharide synthesis enzyme Cap5C VFG1299 Protein 2e-74 57