Gene Information

Name : SLGD_00323 (SLGD_00323)
Accession : YP_003470598.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme CapA
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3944
EC number : -
Position : 338607 - 339269 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAAAACGCTTGATTTATCGATGTTTATAACTGCACTAAAAAAGAATTGGAAATTATTTATTTTAATACCTGTGGT
TTTTGTAGTTATAAGCTTATTAATAACTATATTTTTAATGAAGCCTAAATATGAGGCAAATACACAAGTGTTAGTAAACC
AAAAAGAAAGCAATGAACAATACAGGGCTCAAGAAGTTCAAAGTAATATTCAACTTGTTAATACGTATTCTGAAATTCTT
AAGAGTCCACGTATATTAGAAGACGTAGCGAAAAAAGATAAAAATCTCTCTGCAAGTGAAATTGGCAACATGCTTACAGT
CACAAAACAAGCTGACTCACAAATTTTAAATGTAAGTGTTGAAAATCATAGCAAGGCAGACGCAGAACGCATAGCAAATG
AAATTGTAAGTGTATTTAGTAAAGATATGCCGAAAATCATGGATATAGATAACGTTTCGATATTATCGAAAGCAGATGGA
ACTGCATCCAAAGTTTCACCTAATTTGTCGCAAAACTTAGCAATAGGACTTGTATTAGGCTTAGTACTCACTATTGTAAT
TATCATTTTTAAAGAATTATTTGATAGAAGAATTAAAACAGAAGAAGATGTTATTAGAGAGTTGGACATTCCAGTTCTAG
GTTCAATCCATAAATTGAAATAG

Protein sequence : 
MEKTLDLSMFITALKKNWKLFILIPVVFVVISLLITIFLMKPKYEANTQVLVNQKESNEQYRAQEVQSNIQLVNTYSEIL
KSPRILEDVAKKDKNLSASEIGNMLTVTKQADSQILNVSVENHSKADAERIANEIVSVFSKDMPKIMDIDNVSILSKADG
TASKVSPNLSQNLAIGLVLGLVLTIVIIIFKELFDRRIKTEEDVIRELDIPVLGSIHKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1A AAA64640.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-41 57
SSP0060 YP_300150.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 3e-39 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_00323 YP_003470598.1 capsular polysaccharide synthesis enzyme CapA VFG1297 Protein 5e-34 55