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Name : SLGD_02554 (SLGD_02554) Accession : YP_003472746.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2636085 - 2637368 bp Length : 1284 bp Strand : + Note : - DNA sequence : ATGTTAGATATTAGATTATTTAGAACTGAGCCTGAAAAAGTTAAGGATAAAATTAAACTACGCGGGGATGATCCTAAAGT AGTTGATGACGTGCTTCAATTAGATGAACAACGCCGTAAATTAATTGGTCAAACTGAAGAAATGAAAGCGAATCGCAATA AAGTAAGTGAGCAAATTGCTGAAAAGAAACGCAATCAAGAAAATGCGGATGATGTTATTAAAGAAATGCGTGAGCTAGGC GATAAAATTAAAGAAATTGACACTAAACTTAACGAAATTGATAACAAGATCAAAGATACATTAATCCGCATTCCTAATTT AATCCATGATGATGTGCCACAAGGGGCTTCTGATGAAGAAAACGTAGAACTTAAAAAATGGGGAACGCCACGTGACTTCG ACTTTGAGCCAAAAGCACATTGGGATTTAGTTGAAGAATTAAACATGGCTAACTTTGAACGTGCTGCAAAAGTATCAGGT GCGCGTTTTGTTTATTTAACAAAAGACGGTGCACAATTGGAACGTGCTTTGATGAACTATATGATTACGAAACATACAAC ACAACATGGTTATACTGAAATGATGGTTCCTCAGTTAGTAAATGCTGATACAATGTTTGGTACTGGACAATTACCTAAAT TTGAAGAAGATTTATTTAAAGTAGAAAAAGAGGGTCTATACACAATACCTACAGCAGAAGTACCATTAACAAACTATTAT CGTGATGAAATTATTCAACCAGGTGTCTTACCTGAAAAATTCACTGGCCAATCTGCTTGTTTCCGTAGTGAAGCTGGATC TGCTGGTAGAGATACAAGAGGTTTAATCCGTTTGCATCAATTCGATAAAGTTGAAATGGTTCGCTTTGAAAAACCAGAAG ATTCTTGGAATGCACTAGAAGAAATGACAACGAATGCGGAAGCGATTTTAGAAGAGCTTAAATTACCATATCGTCGTGTT ATTCTATGTACTGGAGACATTGGATTCAGTGCTGCTAAAACATATGACTTAGAAGTATGGTTACCAAGTTATAATGATTA TAAAGAAATTAGTTCATGCTCAAACTGTACAGATTTCCAAGCGCGTCGTGCAAATATTCGATTCAAACGTGATCATGCTG CTAAGCCAGAATTAGCACATACTTTAAACGGTAGTGGACTTGCTGTAGGACGTACGTTTGCGGCAATTGTTGAAAACTAT CAAAATGCTGACGGTTCAATTACTATTCCAGAAGCTTTAGTGCCATTCATGGGCGGTAAAACAGAAATTAAACCAGTTAA ATAA Protein sequence : MLDIRLFRTEPEKVKDKIKLRGDDPKVVDDVLQLDEQRRKLIGQTEEMKANRNKVSEQIAEKKRNQENADDVIKEMRELG DKIKEIDTKLNEIDNKIKDTLIRIPNLIHDDVPQGASDEENVELKKWGTPRDFDFEPKAHWDLVEELNMANFERAAKVSG ARFVYLTKDGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNYY RDEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEKPEDSWNALEEMTTNAEAILEELKLPYRRV ILCTGDIGFSAAKTYDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDHAAKPELAHTLNGSGLAVGRTFAAIVENY QNADGSITIPEALVPFMGGKTEIKPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-120 | 59 |
