Gene Information

Name : SLGD_02527 (SLGD_02527)
Accession : YP_003472719.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2606844 - 2607602 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTATATTAAATGTTAATCATTTATCTAAAGTTTATGGTAAAAAACAAAAATATAAAGCACTACACGATATTAACTT
TTCGGTTGATAAAGGAGAATTTGTAGCAATTATGGGCCCATCTGGTTCAGGTAAAACAACGTTACTTAATGTAATCAGCT
CTATTGATACATTATCAGGTGGTACTGTTGAAATTAATGGTCACACATTAAACAACTTAAATGATAAACAACTTGCACAA
TTTCGTAAAACAGACCTAGGTTTTATCTTTCAAGACTATAGCGTCTTACCAACGTTAACTGTCAAAGAAAACATCATGTT
ACCACTATCAGTACAAAAGTTATCTGCAGCAGAGATGGAGCAAAATTATAACGAAGTAACACAAGCCTTAGGTATCCATG
ACTTAAGTCATAAATATCCTAGTGAAATTTCTGGTGGTCAACAACAAAGAACAGCAGCTGCTCGTGCTTTCGTTCATAAA
CCAAGCATCATTTTTGCTGACGAGCCTACAGGTGCGCTTGATTCTAAAAGCGCCCAAGATTTACTACATCGTTTAGAAGA
TATGAACCAACACTTTAATACAACGATTGTAATGGTTACTCACGATCCTTCAGCAGCAAGTTTCGCACAACGTGTCATTA
TGTTAAAAGATGGTGCTATTTATTCTGATTTCCGACAAGGTGAACACACTAAAAGCGCCTTTTATGACCGCATTATTCAA
CTGCAGTCTTCAATGGGTGGTGTAGCTAATGACGTTTAA

Protein sequence : 
MPILNVNHLSKVYGKKQKYKALHDINFSVDKGEFVAIMGPSGSGKTTLLNVISSIDTLSGGTVEINGHTLNNLNDKQLAQ
FRKTDLGFIFQDYSVLPTLTVKENIMLPLSVQKLSAAEMEQNYNEVTQALGIHDLSHKYPSEISGGQQQRTAAARAFVHK
PSIIFADEPTGALDSKSAQDLLHRLEDMNQHFNTTIVMVTHDPSAASFAQRVIMLKDGAIYSDFRQGEHTKSAFYDRIIQ
LQSSMGGVANDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_02527 YP_003472719.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-34 45
SLGD_02527 YP_003472719.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-35 43
SLGD_02527 YP_003472719.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-39 42