Gene Information

Name : SLGD_02509 (SLGD_02509)
Accession : YP_003472701.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2589522 - 2590217 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGAGTTAAAAGGTGTCAACCGTGCTTTTAAGAATGGCAATGAAACAACCCAAGTATTAAAAGACATTAACTTGAA
CATTCAAGCAGGCGAATTTATTGCAGTTATGGGTCCGTCTGGTTCTGGGAAAAGTACGTTAATTAATATTTTAGGTTTTA
TTGATCGTGGTTATTCAGGAATCTATAATTTTGAACATGAATCTTACAAACAAAGTTCAGATAGTAAATTAGCTGAAATA
CGCAATCGTACAGTGGGTTTTGTGTTTCAAAATTTTAAATTAATTCAAAATCATACTATTTTTGAAAACGTCAGCATTCC
ACTTATTTACAATGGTATGCCAGCGAAAAAAAGATCAGTACGCGTGAAGCAACGGCTTGCTGATGTTGGACTCACAGGGA
AAGAAAATTTACTGCCTAGCAAGTTATCAGGAGGTCAGCAACAACGTGTGGCAATTGCTCGAGCAATCGTCAATGAACCA
AGGTTTATTATTGCTGATGAGCCAACTGGTGCACTTGATTCTGAAACGTCGAAGGAGATTATGGCATTATTTGGAAGTTT
AAATAAGGCACAACAAACAACATTAATTATGGTTACCCATGATCGCAAAGTGGCTGAACAAGCAGACCGTATTATTCATA
TATTAGATGGTCGCATACAAAGCGAAGAGGTGATGACACATGAGCAATTTATATAA

Protein sequence : 
MIELKGVNRAFKNGNETTQVLKDINLNIQAGEFIAVMGPSGSGKSTLINILGFIDRGYSGIYNFEHESYKQSSDSKLAEI
RNRTVGFVFQNFKLIQNHTIFENVSIPLIYNGMPAKKRSVRVKQRLADVGLTGKENLLPSKLSGGQQQRVAIARAIVNEP
RFIIADEPTGALDSETSKEIMALFGSLNKAQQTTLIMVTHDRKVAEQADRIIHILDGRIQSEEVMTHEQFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-32 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-38 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_02509 YP_003472701.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-47 50
SLGD_02509 YP_003472701.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-39 45
SLGD_02509 YP_003472701.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-36 41