Gene Information

Name : SLGD_02501 (SLGD_02501)
Accession : YP_003472693.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.8
Position : 2578524 - 2579699 bp
Length : 1176 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTTTATCTAAAGAAACTGAAGTCATTTTTGATGAACGACGCGGTATTGATTATGACTCAGCAAACCCACCACTGTA
TGATTCTTCAACATTTCATCAACAAGTATTAGGTGGCAATGCACCATTTGATTACGCACGTAGTGGCAATCCAAACCGGC
AACTGCTTGAAGATAAATTAGCTAAGTTAGAAGGTGGGACTTACGCGTTTGCTTATGCTTCAGGTATTGCAGCTATCTCG
GCTGTATTGTTAACGCTGTCGTCCGGAGACCATGTCATACTTCCTGATGATGTTTACGGAGGTACATTCCGTTTAACAGA
ACAAATATTGAACCGTTTTGGTATTGAATTTACAACTGTCGATACCACACAACCCAATAACATTGAACAGGCGATTCAAT
CTAACACAAAGTTGATTTATGTTGAAACACCATCGAACCCATGTTTTAAGATCACTGATATTCGTGCTGTCGCCCAAATC
TCACAGCAACATCAGTTATTATTAGCGGTTGATAATACATTTATGACACCACTAGGCCAGTCACCTTTAGCATTAGGCGC
TGATATTGTTGTACACTCAGCAACTAAATTTTTAAGTGGTCACAGTGACATTATTGCAGGTGCCGCAATTACAAATCGAC
AAGATGTCGCTCAAGCACTTTACTTATTACAAAACGGTACTGGCACCGCATTATCAGCACAAGATAGTTGGACACTAGCT
AAACATCTTAAGACTTTGCCAGTACGCTTTAAGCAAGCTACAGCCAATGCAGAAAGGTTAGTCGAATTTTTATCTCAACG
TTCTGAAATTTCCGAAGTTTATTACCCAGGAAATCATGCTAAACATCTGCAACAAGCATCTAGTGGCGGTGCTGTCATAG
GCTTTAGATTAAAGGATGAGTCAAAAGCACAAACCTTTGTTGATGCATTGACACTACCATTAGTTTCCGTCAGCTTAGGC
GGTGTTGAGACAATTTTATCTCATCCAGCTACTATGTCACATGCAGCTATTCCAGAAGATGTGCGAAATCAACGCGGTAT
TACCTTTGGCTTATTCCGATTAAGTGTAGGATTAGAACAACCTGACGAACTGATTGCCGACATCAAATTTGCACTAAAGG
AGGCTTTTAATGAGTCAATTTCTCAACCAGTTACAAAACAATATCTTAGTAGCTGA

Protein sequence : 
MALSKETEVIFDERRGIDYDSANPPLYDSSTFHQQVLGGNAPFDYARSGNPNRQLLEDKLAKLEGGTYAFAYASGIAAIS
AVLLTLSSGDHVILPDDVYGGTFRLTEQILNRFGIEFTTVDTTQPNNIEQAIQSNTKLIYVETPSNPCFKITDIRAVAQI
SQQHQLLLAVDNTFMTPLGQSPLALGADIVVHSATKFLSGHSDIIAGAAITNRQDVAQALYLLQNGTGTALSAQDSWTLA
KHLKTLPVRFKQATANAERLVEFLSQRSEISEVYYPGNHAKHLQQASSGGAVIGFRLKDESKAQTFVDALTLPLVSVSLG
GVETILSHPATMSHAAIPEDVRNQRGITFGLFRLSVGLEQPDELIADIKFALKEAFNESISQPVTKQYLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-71 47
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-71 43
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-72 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_02501 YP_003472693.1 cystathionine beta-lyase BAC0207 Protein 2e-53 41