|
Name : SLGD_02390 (SLGD_02390) Accession : YP_003472587.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2454820 - 2456307 bp Length : 1488 bp Strand : - Note : - DNA sequence : ATGTCAGAAGAAATGAATGACCAAATGCAGGTCCGTCGTCAAAAGCTACAAGAACTAATCGATTTAGGTATTGATCCTTT TGGGAAACGCTTCGAACGTACAGCTATGGCTGATGACTTAAAAGGAGCATGGGATCAATATTCTAAAGAGGAATTACATG ATAAAGAGGCAGAAAGTCATGTAACCATCGCAGGTCGTTTAATGACTAAACGTGGTAAAGGTAAAGCAGGTTTTGCACAT ATTCAAGACTTGTCAGGTCAAATTCAAATATATGTACGTAAAGATCAAGTTGGAGAAGAACAGTTTGATATTTGGAAAAT CGCTGACCTTGGAGACATTGTTGGTATTGATGGTGTTATGTTTAAAACGAATACAGGTGAATTAACAGTTAAAGCTAAAA CCTTCACTTTATTATCTAAAGCATTACGTCCGTTACCTGATAAATTCCATGGTTTACAAGATATTGAACAACGCTATCGC CAACGTTATCTAGATTTAATTACAAACAAAGAAAGTACGCAAACGTTCATTCATCGTAGTAAAATCATTCAAGAAATGCG TAACTATTTAAATAATAAAGGATTTTTAGAAGTAGAAACACCAATGATGCATCAAATACCTGGTGGAGCTGCTGCACGTC CATTTGTGACACATCATAATGCCTTAGATGCAACTTTATATATGCGAATAGCTATTGAATTACATTTAAAACGTCTTATT GTAGGTGGCTTAGAAAAAGTATATGAAATAGGTCGTGTGTTCCGTAACGAAGGTGTCTCAACTCGACATAACCCAGAGTT TACAATGATTGAACTTTATGAAGCATATGCAGATTTCCACGATATTATGGATTTAACAGAATCACTCATTCGCCATATTG CACAAGAAGTATTTGGCTCAGCAAAAGTTCAATACAATGGAGAAGAAATCGATTTAGAATCATCTTGGACAAGATTGCAT ATTGTAGATGCAGTTAAAGAAGCTACAGGTGTAGATTTCTATCAAGTAAAATCAGACGAAGAAGCAAAAGCATTAGCTAA AGAACACGGTATTGAAATTAAAGAAAACATGAAGTATGGACATATCTTGAATGAGTTCTTTGAACAAAAAGTTGAAGAAA CACTTATTCAACCAACATTCATTTATGGACATCCAATCGAAATATCACCATTAGCGAAGAAAAATCCGGAAGACCCAAGA TTTACAGATCGTTTTGAACTATTTATTGTTGGAAGAGAACATGCAAATGCCTTCACAGAACTAAATGACCCAATCGATCA AAGAGAACGCTTTGAAGCACAATTAGTAGAAAAAGCACAAGGTAATGATGAAGCACATGAAATGGATGAAGATTTCATTG AAGCATTAGAATATGGTATGCCGCCAACAGGTGGATTAGGAATCGGAATTGATAGACTTGTGATGTTATTAACAGATTCA CCATCTATTCGTGATGTACTATTATTCCCATATATGCGACAAAAATAA Protein sequence : MSEEMNDQMQVRRQKLQELIDLGIDPFGKRFERTAMADDLKGAWDQYSKEELHDKEAESHVTIAGRLMTKRGKGKAGFAH IQDLSGQIQIYVRKDQVGEEQFDIWKIADLGDIVGIDGVMFKTNTGELTVKAKTFTLLSKALRPLPDKFHGLQDIEQRYR QRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETPMMHQIPGGAAARPFVTHHNALDATLYMRIAIELHLKRLI VGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYNGEEIDLESSWTRLH IVDAVKEATGVDFYQVKSDEEAKALAKEHGIEIKENMKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPR FTDRFELFIVGREHANAFTELNDPIDQRERFEAQLVEKAQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDS PSIRDVLLFPYMRQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-118 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SLGD_02390 | YP_003472587.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-118 | 50 |
