Gene Information

Name : SLGD_02195 (SLGD_02195)
Accession : YP_003472410.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : manganese ABC transporter periplasmic-binding protein SitA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2279398 - 2280318 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence :
ATGCGAAAGTTAATTCCCTTTATACTTGCACTGTTATTAGTATTAACAGCTTGCGGAAGTAAAGATACATCGCACAATCA
TAAAAAACTTAACGTTGTAACAACAAACTCTATTATATATGATATGGTCAAACATGTCGGTGGTAATAATGTAAATATAC
ATAGTATTGTTCCAGTAGGACAAGACCCTCATGAATATGAAGTAAAACCGAAAGATATTAAAAAGCTTACAGATGCTGAC
GTCATATTTTACAATGGTTTAAATTTAGAATCTGGTGATGCATGGTTTGAAAATGCTTTAAAACAAGCCGGAAAATCACT
GAAAGATAAAAATGTTATTGCTGTTTCCAAAGGCGTTAAACCCATTTATCTAAACGGAGAAAATGGCAATAAAGACAAAC
TAGACCCACATGCTTGGCTAAGCCTAGACAACGGTATTCAATATGTCAAAAATATTCAACAAGCCTTGAAAGATATTGAT
AAAAAACATGCTTCATCTTACGACAAGCATGGCAATAAGTATTTAAATAAACTTACAAAATTAAATAATCATAGTAAAGC
AAAATTTAATGACATACCGAAAAAAGAACGAACGATGATTACCAGTGAAGGCGCCTTTAAATATTTCTCAAAACAATTCA
ATATTCATTCAGGATATATTTGGGAGATTAATACCGAAAAACAAGGTACACCTGAACAAATGAAACAAGCAACAAAATTT
GTTAAAGATAATAAAGTAAAACATTTACTTGTTGAAACAAGTGTAGATAAAAAAGCTATGCAAAGCCTTTCTGAAGAAAC
CAATAAAGATATTTATGGCGAAGTTTTTACCGATTCAATTGGTAAAAAAGGAAGCAAAGGCGATTCATACTACAATATGA
TGAAATATAATATTGATATCATTCATAATAGTATGAAGTAA

Protein sequence :
MRKLIPFILALLLVLTACGSKDTSHNHKKLNVVTTNSIIYDMVKHVGGNNVNIHSIVPVGQDPHEYEVKPKDIKKLTDAD
VIFYNGLNLESGDAWFENALKQAGKSLKDKNVIAVSKGVKPIYLNGENGNKDKLDPHAWLSLDNGIQYVKNIQQALKDID
KKHASSYDKHGNKYLNKLTKLNNHSKAKFNDIPKKERTMITSEGAFKYFSKQFNIHSGYIWEINTEKQGTPEQMKQATKF
VKDNKVKHLLVETSVDKKAMQSLSEETNKDIYGEVFTDSIGKKGSKGDSYYNMMKYNIDIIHNSMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 2e-60 48
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 1e-60 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_02195 YP_003472410.1 manganese ABC transporter periplasmic-binding protein SitA VFG1359 Protein 5e-66 52
SLGD_02195 YP_003472410.1 manganese ABC transporter periplasmic-binding protein SitA VFG2157 Protein 4e-69 52
SLGD_02195 YP_003472410.1 manganese ABC transporter periplasmic-binding protein SitA VFG2165 Protein 2e-65 48