Gene Information

Name : SLGD_02164 (SLGD_02164)
Accession : YP_003472379.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : bacitracin ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2245498 - 2246259 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
GTGTCAATATTAGTAGTTAAAGAATTAACTAAAATATACGGAAGTAAAGATATGCAGCAGGAAGTTTTAAGAGGTATTAA
TCTTTCAGTTGATGAAGGTGAATTTGTCTCAATAATGGGACCTTCTGGCTCTGGAAAAACGACGTTATTAAATATTTTGG
GATCAATTGATTATATGTCACAAGGTTCAGTAGAATTAGCTGGACATAAACTAGAAAAAATGTCGAATAAAGCGCTATCT
GATATGCGTAAGCGGGATATTGGGTTTATTTTTCAAGATTATAATTTACTACATACATTGACGGTAAAAGAGAATATTTT
ATTGCCGTTATCTGTACAAAAAATTAGTAAAGAGATGGCAATGAAGCGTTATCATAAAGTTGTTGAAACATTAAATATTG
CAGAATTGGGTGATAAATACCCTTCAGAACTTTCTGGTGGTCAACGGCAGCGAACATCTGCCGCACGCGCTTTTATTACA
TTACCTAAAATTATTTTTGCAGATGAACCTACAGGCGCTTTAGACTCCAAAAGTTCTCAAGATTTATTGGAACGACTTGT
CTATATGAATAAATATCGACAAACGACAATTATCATGGTCACGCATGATCCATTAGCAGCAAGCTTTTCTAATCGTGTAG
TCATGTTGAAAGATGGACAAATATTTACTGAGCTCTATCAAGGGGATGATGACGATGAAACATTTTATCGTGAAATTATT
CGCACACAAAGTGTTTTAGGTGGGGTTCATCATGAATTTTAA

Protein sequence :
MSILVVKELTKIYGSKDMQQEVLRGINLSVDEGEFVSIMGPSGSGKTTLLNILGSIDYMSQGSVELAGHKLEKMSNKALS
DMRKRDIGFIFQDYNLLHTLTVKENILLPLSVQKISKEMAMKRYHKVVETLNIAELGDKYPSELSGGQRQRTSAARAFIT
LPKIIFADEPTGALDSKSSQDLLERLVYMNKYRQTTIIMVTHDPLAASFSNRVVMLKDGQIFTELYQGDDDDETFYREII
RTQSVLGGVHHEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_02164 YP_003472379.1 bacitracin ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 43
SLGD_02164 YP_003472379.1 bacitracin ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-38 42
SLGD_02164 YP_003472379.1 bacitracin ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-34 41