Gene Information

Name : SLGD_02126 (SLGD_02126)
Accession : YP_003472341.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : CsbB stress response protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 2205429 - 2206451 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATCAGAGTCATTGTCCCCTGTTATAACGAAGGAGAAGTCGTATTAAAAACATATGAGCGATTGACTGAAATTAT
GTTGAAAGACAGTAACGAAAAAAATTATGACTATGATTTATTATTTATTGATGATGGTAGCAAAGATAGTACGATTCAAC
ACATACAGCAATTGTCGTTAGAAGATAAACACGTAAAGTTTATTTCATTTAGTAGGAATTTTGGTAAAGAATCAGCGATG
ATTGCAGGTTTTCACCATAGTGTTGATGTAGACGCTGTCATTATGATAGATGGTGATTTACAGCATCCTCCTGAATTTAT
ACCCAATATGATTGATGGTTATCTAGAGGGTTATGATCAAGTCATTGCCCAACGTGATAGAGAAGGCGAACAGCTATCAC
GTAAAATAGTGACAAAGATGTATTATAAATTGATTAATGCATTTGTTGAAGATGTCCAGTTTGTCGATGGGGTAGGAGAT
TTTAGATTGTTGAGTCAACGAGCTGTGTGTGCAATTGCTGAGTTGCAAGAGAACAATCGTTTTTCAAAAGGATTATTTGC
TTGGATTGGTTATAATACAAAAGTCTTTTCATATAAAAATGTAGAACGTGAAGCGGGACAATCAAAGTGGAATTTTAGAA
AGTTATTTAATTATGGTATTGATGGTTTAATTTCATTTAATAGTAAGCCATTACGGACAATGATTTATTTTGGATTATTT
ATTTTTGCAATTAGCCTTATCTATATTATTTATTTGTCTATAGGCATTATCGTAAATGGCATTAGTAATCCAGGTTATTT
CACGACGATAGCTGCTATTTTGTTACTTGGTGGTATTCAGCTTATCTCTATAGGTGTTGTCGGAGAATATATCGGACGGA
TTTATTATGAAGTGAAGCAAAGACCTAAGTACATTGTACAAGCTTCGAATTTAACCTATGAAAATGGTCATAGTCCCAAT
GCATATCAATGTAATATAAACCATGAGCATACCGTGAAAGATAAAGAAAAAGAGCATATATAA

Protein sequence :
MKIRVIVPCYNEGEVVLKTYERLTEIMLKDSNEKNYDYDLLFIDDGSKDSTIQHIQQLSLEDKHVKFISFSRNFGKESAM
IAGFHHSVDVDAVIMIDGDLQHPPEFIPNMIDGYLEGYDQVIAQRDREGEQLSRKIVTKMYYKLINAFVEDVQFVDGVGD
FRLLSQRAVCAIAELQENNRFSKGLFAWIGYNTKVFSYKNVEREAGQSKWNFRKLFNYGIDGLISFNSKPLRTMIYFGLF
IFAISLIYIIYLSIGIIVNGISNPGYFTTIAAILLLGGIQLISIGVVGEYIGRIYYEVKQRPKYIVQASNLTYENGHSPN
AYQCNINHEHTVKDKEKEHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-36 44
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_02126 YP_003472341.1 CsbB stress response protein VFG0670 Protein 8e-38 45