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Name : SLGD_02003 (SLGD_02003) Accession : YP_003472218.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG2403 EC number : - Position : 2082600 - 2083469 bp Length : 870 bp Strand : - Note : SAV0790-like protein in superantigen-encoding pathogenicity islands SaPI DNA sequence : ATGAATGAAATTAAATTAGAATATGACACACATGTTTCAGTGGTACATTATGAAAGTTTAGACTCACGTTCATTTAAGAG CTTTTCAAAACCTAAATGGAGTAAGTTAATTAATAAACTGTCTGTGCCTATAGAAGCAAATTATAAGTATGCACGTGGTG TTGCTGTTTACGGTGATATTAAAGACGGTACAAATGATCATGGTGAAATTATCAAAAAGCATCGCAATGACGTTAATGTC GTATACAGAGATGTGATTGTACTTGATTACGATGAAATAAATGATTTAAAGCAATTACATGAAGCAATCAGCTCAGTTTT AAGCAATGTTGCATGGTTTTGGCACACAAGTTACTCGCACAGAAATGAACAAGCTAGAATACGCCTGTATATCCCTCTGA ATGAGCGAATAAGTGCAGATGATTATCGTAATTATACAAAATTATTAGCAAATAAAATTGGACATAAAGTGGATGAAGGT TCATATCAGCCAAGTAGATGTTTTGCACTACCAGTTATTCAAAAAGGACACATATTTATTAAACGAGTGAATGACTGTCC AATTATCGATGTTGATATGCTCGAACAGTGGTCAAAGGAGTATAAACAATCAAATGGTAATCCTAATATCAAAGGGTACA CACGACGTGATAGTGCGTATTGGCGAGATATAGCTTTTGGTGTAAGTGAGGGAGAGCGCAATTCAACATTAGCTTCAATT ACAGGTTATCTTTTGCGTAGGTATGTAGATCCAAACTTAGTTTATGGGTTAGTGAGTGCGTGGGCAAGTGTATGCAAACC ACCTATTAATCAAAGTGAAGTAAACAATACTTTTAAAAGTATTTTGAAAAAAGATTGTAAAAACAGTTAG Protein sequence : MNEIKLEYDTHVSVVHYESLDSRSFKSFSKPKWSKLINKLSVPIEANYKYARGVAVYGDIKDGTNDHGEIIKKHRNDVNV VYRDVIVLDYDEINDLKQLHEAISSVLSNVAWFWHTSYSHRNEQARIRLYIPLNERISADDYRNYTKLLANKIGHKVDEG SYQPSRCFALPVIQKGHIFIKRVNDCPIIDVDMLEQWSKEYKQSNGNPNIKGYTRRDSAYWRDIAFGVSEGERNSTLASI TGYLLRRYVDPNLVYGLVSAWASVCKPPINQSEVNNTFKSILKKDCKNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAC28965.2 | - | Not tested | SaPI1 | Protein | 3e-120 | 96 |
| SAV0790 | NP_371314.1 | hypothetical protein | Not tested | vSa3 | Protein | 3e-118 | 95 |
| unnamed | AET14336.1 | DNA primase-like protein | Not tested | SaPI68111 | Protein | 1e-89 | 95 |
| unnamed | AAL04137.1 | unknown | Not tested | SaPI3 | Protein | 1e-117 | 94 |
| SACOL0896 | YP_185767.1 | pathogenicity island protein | Not tested | vSa1 | Protein | 2e-117 | 94 |
| SAB1905c | YP_417364.1 | mobile element-associated protein | Not tested | SaPIbov2 | Protein | 8e-103 | 83 |
| SAAV_0796 | YP_003281719.1 | pathogenicity island protein ORF15 | Not tested | SaPIAv | Protein | 4e-101 | 81 |
| SAR0374 | YP_039831.1 | hypothetical protein | Not tested | SaPI4 | Protein | 3e-101 | 81 |
| unnamed | AAG29612.1 | Orf15 | Not tested | SaPIbov | Protein | 1e-101 | 81 |
| SAB0350 | YP_415852.1 | pathogenicity island protein | Not tested | SaPIbov | Protein | 2e-101 | 81 |
| unnamed | ABJ97299.1 | hypothetical protein | Not tested | SaPI2 | Protein | 1e-102 | 80 |
| SAV2022 | NP_372546.1 | hypothetical protein | Not tested | vSa4 | Protein | 3e-102 | 80 |
| SA1829 | NP_375130.1 | hypothetical protein | Not tested | vSa4 | Protein | 3e-102 | 80 |
| unnamed | AAP55245.1 | unknown | Not tested | SaPIbov2 | Protein | 5e-72 | 57 |
