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Name : SLGD_02002 (SLGD_02002) Accession : YP_003472217.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG5545 EC number : - Position : 2081114 - 2082583 bp Length : 1470 bp Strand : - Note : SAV0791-like protein in superantigen-encoding pathogenicity islands SaPI DNA sequence : TTGGAAGATGTTACAAACGAAGAAGTATTTGAAATGATTGATAGCAGAACCGATGTTTTAAATACTAATGATTGGAAAAG TCAATTAAGGCGTTCTGCTACTACACAAGCATTGAAAAAAACGACTACAAATGCTGAAATCATATTGTGTAATGATGAGA GTTTAAAAGGGCTAGTACAATATGACGCTTTTGAAAAAGTAACCAAACTGAAACGTCTACCGTATTGGAGGTCAAAAGGG GATGCGAATTATTATTGGGCTGATATAGATACCACACATGTGATTTCACATATTGATAGATTGTATAATGTACAGTTTAG CCGTGACCTTATTGATACTGTAATTGAAAAGGAAGCATATCAAAATAGATTCCACCCTATTAAATCGATGGTTGAATCTA AATCATGGGACGGAATCAAAAGAATTGAAACGTTCTTCATTGATTATTTAGGTGCTGAAGATAACCACTACAATAGAGAA GTTACAAAAAAATGGATGATGGGTGCAGTTGCTAGAATCTATCAGCCAGGTATTAAATATGATTCCATGATTATTTTATA TGGTGGTCAAGGTGTTGGGAAATCTACGGCAGTGAGTAAATTGGGAGGTCATTGGTATAACCAAAGTATTAAAACCTTTA AAGGTGATGAGGTCTATAAGAAATTGCAGGGTTCTTGGATATGTGAAATTGAAGAACTGTCGGCATTTCAAAAGTCTACT ATTGAAGATATTAAGGGTTTTATAAGTGCCATTGTAGATATTTATAGAGCTTCGTATGGTAAACGCACAGAGCGTCATCC TAGACAGTGTGTGTTTGTAGGGACAACCAATAACTATGAGTTTTTAAAAGACCAAACAGGCAATCGTCGTTTTTTCCCTA TTACGACAGATAAAAATAAAGCAACTAAAAGCCCGTTTGACGATCTAACACCAGATGTTGTGCAACAAATGTTTGCTGAA GCTAAAGAATATTTTGATGAGAATCCGACGGATAAAGCATTGTTATTAGATAAAGAAGCGAGTGAAATGGCTTTAAAAGT CCAAGAAGCTCATTCTGAAAAAGATGCTTTAGTTGGAGAAATAGAAGAATTCCTTGAACGTCCTATTCCGTCAGACTATT GGTATAGAACGTTAGAAGAAAAAAGAGTGTCTGCGCATGATGTTATAGACCAAGACTATATTAAATTATATGGTGATGGT AAATTGATTGAATTACCGAATACAAAACCAGGTGCTTATGTATGGCGTGACAAGGTATGTAGCATGGAAATTTGGAAAGT GATGATGAAACGAGATGACCAACCACAACAACACCATTTAAGAAAAATTGATAAAGCGTTAAGAAATACAAGTTATTGTG GGCAAAGTAAGTCGCGTCATAGATTTGGTGAAGGTATTGGTAGACAATATGGTTTTGATATTAATTTAATATCCTATTAT CAAGGTTTAAAAAGTAAAGAACAAAAATAA Protein sequence : MEDVTNEEVFEMIDSRTDVLNTNDWKSQLRRSATTQALKKTTTNAEIILCNDESLKGLVQYDAFEKVTKLKRLPYWRSKG DANYYWADIDTTHVISHIDRLYNVQFSRDLIDTVIEKEAYQNRFHPIKSMVESKSWDGIKRIETFFIDYLGAEDNHYNRE VTKKWMMGAVARIYQPGIKYDSMIILYGGQGVGKSTAVSKLGGHWYNQSIKTFKGDEVYKKLQGSWICEIEELSAFQKST IEDIKGFISAIVDIYRASYGKRTERHPRQCVFVGTTNNYEFLKDQTGNRRFFPITTDKNKATKSPFDDLTPDVVQQMFAE AKEYFDENPTDKALLLDKEASEMALKVQEAHSEKDALVGEIEEFLERPIPSDYWYRTLEEKRVSAHDVIDQDYIKLYGDG KLIELPNTKPGAYVWRDKVCSMEIWKVMMKRDDQPQQHHLRKIDKALRNTSYCGQSKSRHRFGEGIGRQYGFDINLISYY QGLKSKEQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAV0791 | NP_371315.1 | hypothetical protein | Not tested | vSa3 | Protein | 0.0 | 98 |
| unnamed | AET14337.1 | hypothetical protein | Not tested | SaPI68111 | Protein | 0.0 | 98 |
| SACOL0897 | YP_185768.1 | hypothetical protein | Not tested | vSa1 | Protein | 0.0 | 96 |
| unnamed | AAL04136.1 | unknown | Not tested | SaPI3 | Protein | 0.0 | 96 |
| unnamed | AAL67615.1 | - | Not tested | SaPI1 | Protein | 0.0 | 95 |
