Gene Information

Name : SLGD_02001 (SLGD_02001)
Accession : YP_003472216.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2080466 - 2080828 bp
Length : 363 bp
Strand : -
Note : SAV0792-like protein in superantigen-encoding pathogenicity islands SaPI

DNA sequence :
ATGAATAAAAATCAATTAAAGTCAGAAATTTTAGAATATATAAAGGCGCATGCTGGCACATCATTTGTAGAAATAGAACA
TGTATTTGAAGAAAATAACTTTGATTATAAAGGTGACGGCGCATATACAAGTGGCCAACATCCCAATGTTGTGTTTTGGA
TTGGGTGGAATCAAGAAGCGTTTGATGTTATCGCTGAACTTAAAAAAGATGGACGTATTGAGATGGATATTTGTGAGCCA
ATTGTTTATATGGTTGATGGTAAAGGTTTGGATTTGCCTATTGTAAGGTCGAAAAACATTAAAACAGATCATTGGTTACC
TGTCACGTTTACTATTAGTAAGAAAGAAACGGAGTGTGTCTAA

Protein sequence :
MNKNQLKSEILEYIKAHAGTSFVEIEHVFEENNFDYKGDGAYTSGQHPNVVFWIGWNQEAFDVIAELKKDGRIEMDICEP
IVYMVDGKGLDLPIVRSKNIKTDHWLPVTFTISKKETECV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL04135.1 unknown Not tested SaPI3 Protein 5e-51 99
SACOL0898 YP_185769.1 pathogenicity island protein Not tested vSa1 Protein 7e-51 99
unnamed AAL67613.1 - Not tested SaPI1 Protein 4e-51 98
SAV0792 NP_371316.1 hypothetical protein Not tested vSa3 Protein 2e-50 98
unnamed AET14338.1 hypothetical protein Not tested SaPI68111 Protein 6e-51 97
MW0752 NP_645569.1 hypothetical protein Not tested vSa3 Protein 3e-37 67
SAPIG0477 YP_005733287.1 pathogenicity island protein Virulence SAPI-S0385 Protein 1e-37 67
SAUSA300_0810 YP_493510.1 hypothetical protein Not tested SaPI5 Protein 1e-37 67
SAOV_0422 YP_005735938.1 pathogenicity island protein Not tested SaPI1 Protein 1e-37 66
SAOV_2057c YP_005737500.1 hypothetical protein Not tested SaPI2 Protein 1e-37 66