Gene Information

Name : SLGD_01999 (SLGD_01999)
Accession : YP_003472214.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2079542 - 2080183 bp
Length : 642 bp
Strand : -
Note : SAV0794-like protein in superantigen-encoding pathogenicity islands SaPI

DNA sequence :
ATGAACATAGAAACTATCGTAAATCAATTTGAAACACGAGCAGGCACGTTACTAAGGTACTACACAGGATTATTAGAACA
TAGTAAAGTGCAACCATGTTGCTTTAAGTTATATAATGATCCATTTGATATAGTATACGTGATGATGAACGGGAAGTTAT
TCGGTCATGTATATATTCAAGATTGTAACGTGAGACAATCGTTTGAATTAGCTACTCCCAAGCACACAGAGGGGCTTATA
AGAAGTATTGAGGGGCATTATACCGGATATGAAATTGAAGATGACAAACACATATCTATTAGCGATATGATGGCCAGTCA
ATTATTTGAAGATGAGTATTTTATGTATGGGCTAGAAACTTATGCAGAATCAAATAATAGTGATGTGTTTGAGTACCTAG
AAAATGGATTTGATACCGATACACTTGAGGGCATTCAATCGAGTAATACTGATGTGATAGCGAATATTGAAATGTTGTAT
CAGTTAGCTACGGGAATCAATGAACCAGCACTAGAGTTGGTTGAGGGATTAAAATTAGTAACTGAGTTTGTACAAGATGA
GAAGGCTACACAAGAGGATTACAAGGCTTTAGAACGTAAATTGAATGATCTAAAAGCGTCTTACTATAGCTTGAGTAAAT
AA

Protein sequence :
MNIETIVNQFETRAGTLLRYYTGLLEHSKVQPCCFKLYNDPFDIVYVMMNGKLFGHVYIQDCNVRQSFELATPKHTEGLI
RSIEGHYTGYEIEDDKHISISDMMASQLFEDEYFMYGLETYAESNNSDVFEYLENGFDTDTLEGIQSSNTDVIANIEMLY
QLATGINEPALELVEGLKLVTEFVQDEKATQEDYKALERKLNDLKASYYSLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC28959.2 - Not tested SaPI1 Protein 1e-90 94
SAV2019 NP_372543.1 hypothetical protein Not tested vSa4 Protein 3e-91 93
SA1826 NP_375127.1 hypothetical protein Not tested vSa4 Protein 3e-91 93
unnamed AET14340.1 hypothetical protein Not tested SaPI68111 Protein 5e-90 93
SAB1902c YP_417361.1 mobile element-associated protein Not tested SaPIbov2 Protein 7e-90 93
SAAV_0799 YP_003281722.1 pathogenicity island protein ORF11 Not tested SaPIAv Protein 3e-89 92
SAR0377 YP_039834.1 hypothetical protein Not tested SaPI4 Protein 9e-90 92
unnamed AAG29608.1 Orf11 Not tested SaPIbov Protein 2e-90 92
SAB0353 YP_415855.1 pathogenicity island protein Not tested SaPIbov Protein 3e-90 92
unnamed AAL04133.1 unknown Not tested SaPI3 Protein 9e-89 91
SACOL0900 YP_185771.1 pathogenicity island protein Not tested vSa1 Protein 1e-88 91
unnamed ABJ97296.1 hypothetical protein Not tested SaPI2 Protein 2e-90 91
SAV0794 NP_371318.1 hypothetical protein Not tested vSa3 Protein 9e-86 89
unnamed AAP55242.1 unknown Not tested SaPIbov2 Protein 3e-78 77