|
Name : SLGD_01995 (SLGD_01995) Accession : YP_003472210.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Virulence Product : terminase, superantigen-encoding pathogenicity islands SaPI Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3728 EC number : - Position : 2077277 - 2077849 bp Length : 573 bp Strand : - Note : - DNA sequence : ATGAGTGAGTTAACGGCAAAACAAGCGCGTTTTGTGAATGAGTATATTAGAACACTTAATGTGACACAAAGTGCCATAAA AGCAGGCTATAGCGCAAATAGTGCACATGTGACAGGGTGTAGGTTATTGAAGAAACCGCATATTAAGCATTATATACAAG AACAAAAAGATAAGATTATAGATGAGAATGTATTAACTGCAAAAGAGTTACTACATGTGCTTACGAATGCGGCAGTTGGT GATGAGACAGAAACGAAAGAAGTTGTGGTCAAGCGTGGGGAATATAAAGAGAATCCACAAAGTGGCAAAGTACAGTTAGT CTATAATGAACATGTTGAACTGATAGAGGTGCCAATTAAGCCAAGCGATCGTTTAAAAGCTCGTGATATGCTTGGGAAAT ATCATAAACTGTTTACTGAGAAAAAAGAGTTCACTGCTGACACTCCGGTAATTATAAATATTGGTGAATGGGACGAAGAA GATGAAGAAGATAAACAGAGAACACTAGATAAAATAAATGATAACTATCCTAATAGAACAATGATTGTTAATAATGTACC GTTAGAGGATTAA Protein sequence : MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKHYIQEQKDKIIDENVLTAKELLHVLTNAAVG DETETKEVVVKRGEYKENPQSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTEKKEFTADTPVIINIGEWDEE DEEDKQRTLDKINDNYPNRTMIVNNVPLED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ter | ABJ97289.1 | terminase | Not tested | SaPI2 | Protein | 9e-75 | 85 |
| SAV0800 | NP_371324.1 | bacteriophage terminase small subunit | Not tested | vSa3 | Protein | 2e-74 | 85 |
| SAR0382 | YP_039839.1 | terminase small subunit | Not tested | SaPI4 | Protein | 2e-74 | 85 |
| SA1820 | NP_375121.1 | hypothetical protein | Not tested | vSa4 | Protein | 2e-74 | 84 |
| unnamed | AAL04127.1 | unknown | Not tested | SaPI3 | Protein | 3e-71 | 84 |
| unnamed | AAG29602.1 | Orf5 | Not tested | SaPIbov | Protein | 5e-74 | 84 |
| unnamed | AET14346.1 | terminase small subunit | Virulence | SaPI68111 | Protein | 1e-74 | 84 |
| SACOL0906 | YP_185777.1 | phage terminase | Not tested | vSa1 | Protein | 1e-73 | 84 |
| ter | AAL67611.1 | terminase | Not tested | SaPI1 | Protein | 1e-74 | 84 |
| SAB0359 | YP_415861.1 | pathogenicity island protein | Not tested | SaPIbov | Protein | 8e-74 | 84 |
| SAV2012 | NP_372536.1 | bacteriophage terminase small subunit | Not tested | vSa4 | Protein | 2e-74 | 84 |
| SAAV_0805 | YP_003281728.1 | pathogenicity island protein ORF5; phage terminase family protein | Not tested | SaPIAv | Protein | 2e-73 | 83 |
| unnamed | AAP55238.1 | bacteriophage terminase small subunit | Not tested | SaPIbov2 | Protein | 1e-76 | 83 |
| SACOL2014 | YP_186834.1 | phage terminase | Not tested | vSa4 | Protein | 1e-72 | 83 |
| MW1949 | NP_646766.1 | hypothetical protein | Not tested | vSa4 | Protein | 1e-72 | 82 |
