Gene Information

Name : SLGD_01993 (SLGD_01993)
Accession : YP_003472208.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : cadmium resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 2076197 - 2076814 bp
Length : 618 bp
Strand : -
Note : -

DNA sequence :
ATGATTCAGACTATTGTAACTGCTGCTATTCTTTATATTGCGACAGCAGTAGATTTATTAGTGATTTTGTTAATATTTTT
TGCTAAAGCAAAGACTAAAAAGGAATATCGAGATATTTATATTGGTCAATATGTAGGATCTGTGACATTGATTGTCGTAA
GTTTATTCTTTGCCTTTGTCTTAAATTATGTTCCTGAAAAATGGATATTAGGATTATTAGGGTTAATACCGATTTATTTA
GGAATTAAAGTGGCTATTTATGATGATTGTGAAGGAGAAAAGAGAGCTAAAAAAGAATTGAATGAAAAAGGATTGTCTAA
ATTAGTTGGTACGGTTGCAATTGTTACGATAGCAAGTTGTGGTGCTGATAATATTGGTTTATTTGTTCCGTATTTTGTGA
CATTAAGTGTTACTAATTTATTAATTACTTTGTTTGTCTTTTTAATTTTAATTTTCTTCTTGGTATTTACTGCACAAAAA
TTAGCTAATATTCCAGGAGTTGGAGAAATTGTTGAGAAATTTAGCCGTTGGATTATGGCTGTTATTTATATAGCTTTAGG
TTTATTTATTATTATAGAAAATGACACTATTCAAACAATTTTAGGATTTATATTTTAA

Protein sequence :
MIQTIVTAAILYIATAVDLLVILLIFFAKAKTKKEYRDIYIGQYVGSVTLIVVSLFFAFVLNYVPEKWILGLLGLIPIYL
GIKVAIYDDCEGEKRAKKELNEKGLSKLVGTVAIVTIASCGADNIGLFVPYFVTLSVTNLLITLFVFLILIFFLVFTAQK
LANIPGVGEIVEKFSRWIMAVIYIALGLFIIIENDTIQTILGFIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 1e-67 99
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 2e-65 91
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 5e-61 85

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_01993 YP_003472208.1 cadmium resistance protein BAC0057 Protein 1e-66 94