Gene Information

Name : SLGD_01992 (SLGD_01992)
Accession : YP_003472207.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : cadmium efflux system accessory protein
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 2075831 - 2076178 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTTATGAAAATGCTTGTGATGTGATCTGTGTACATGAGGATAAAGTTAACAATGCTTTAAGTTTTTTAGAAGATGA
TAAATCTAAGAAATTACTTAACATTTTAGAAAAAATTTGTGATGAGAAGAAATTGAAAATTATATTATCTTTGATTAAAG
AAGATGAGTTGTGTGTTTGTGATATTTCTTTGATATTGAAAATGAGTGTTGCTTCAACTTCACATCATTTAAGACTTTTA
TATAAAAATGAGGTACTTGATTTTTATAAAGAGGGAAAGATGGCATATTATTTTATTAAAGACGATGAAATAAGAGAATT
TTTCTCTAAAAATCAGGAGGGTTTTTGA

Protein sequence : 
MSYENACDVICVHEDKVNNALSFLEDDKSKKLLNILEKICDEKKLKIILSLIKEDELCVCDISLILKMSVASTSHHLRLL
YKNEVLDFYKEGKMAYYFIKDDEIREFFSKNQEGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadC YP_189777.1 CadC family transcriptional regulator Not tested vSe1 Protein 2e-35 95
cadX YP_254239.1 cadmium efflux system accessory protein CadX Not tested ¥ðSh1 Protein 6e-33 85
cadX YP_252015.1 hypothetical protein Not tested SCCmec Protein 2e-23 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_01992 YP_003472207.1 cadmium efflux system accessory protein BAC0059 Protein 1e-14 45
SLGD_01992 YP_003472207.1 cadmium efflux system accessory protein BAC0056 Protein 5e-12 42