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Name : SLGD_00174 (SLGD_00174) Accession : YP_003470449.1 Strain : Staphylococcus lugdunensis HKU09-01 Genome accession: NC_013893 Putative virulence/resistance : Resistance Product : Arsenic efflux pump protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 186935 - 188227 bp Length : 1293 bp Strand : + Note : - DNA sequence : ATGATAACTATGCTAGCGATCCTTATATTTATAGTGACGATTATTTTTATTATTTGGCAGCCAAAGGGCTTAGATATTGG TATCACTGCATTGATGGGTGCCATCATTGCTTTATTAACAGGTGTGGTCAGCATTGGAGATGTTGTTAAAGTTACTGATA TTGTATGGAATGCGACGTTAACTTTTGTCGCATTGATTATCATCTCGTTAATTTTAGATGAAATTGGCTTTTTTGAATGG GCAGCATTACATATGGTACGTGCTTCTAATGGTAAAGGGGTAAAGATGTTTATCTATATTTTACTTTTAGGTGCAATCGT TGCAGCTTGCTTTGCTAATGACGGTGCAGCCCTCATTTTAACGCCTATTGTCTTAGCTATGGTACGTCATCTTGGCTTTA AAGAAAAAGTCATTTTCCCATTTATTATTGCATGTGGTTTTATTGCAGATACGACATCATTGCCTTTTACCGTCAGCAAT TTAGTGAACATCGTTTCAGCTGATTTTTTTAGTTTGAGTTTTATGGGTTACGCAATTAGAATGCTAATACCGAATTTCTT TTCCCTTTTTGCAAGTATCATTGTGTTGTGGCTTTATTTTAGAAAAACAATTCCTAAACATTTTGATCATTCACAATTAA AAGAACCTACAGCAGTGATTAAAGATTATCGATTATTTCGTTGGTCATGGCTTGTACTCAGTGTGCTATTTATAGGTTAT ATACTAAGTGAATTTTTACCTATACCGATATCATTTATTGCTGGAACGATTGCACTTGTTTTCTTAGCATTAGCACTGCA ATCGCATGTTGTTAATACAACAAAGGTGGTCAAAGGTGCACCATGGAATATTGTTATCTTTTCCATAGGAATGTATTTGG TTGTTTTTGGTTTGAAAAATGTAGGCATTACAACATTATTATCACATGTATTAGTGACGATAGCACATCATGGCCTCTTT ACAAGCATTATGGGTATGGGCTTTATGTCAGCAATATTATCTTCTGTGATGAATAATATGCCTACCGTGATGATTGATGC GATAGCTATCGACCAAGCAGCTGTAGTAGGAATAGTTAAAGAAGGCATGATTTACGCTAATGTGATTGGTTCTGACTTAG GACCTAAAATGACGCCTATTGGTTCCCTTGCCACATTGTTATGGCTTCATGTCTTAAGCCAAAAAGGGATGAAAATTTCT TGGTGGACGTATATTAAGACAGGGGTTGTGATTACATTACCTGTCCTCTTTATCACATTAATAGGTTTATACATCACTTT GAAGTGGCTATAA Protein sequence : MITMLAILIFIVTIIFIIWQPKGLDIGITALMGAIIALLTGVVSIGDVVKVTDIVWNATLTFVALIIISLILDEIGFFEW AALHMVRASNGKGVKMFIYILLLGAIVAACFANDGAALILTPIVLAMVRHLGFKEKVIFPFIIACGFIADTTSLPFTVSN LVNIVSADFFSLSFMGYAIRMLIPNFFSLFASIIVLWLYFRKTIPKHFDHSQLKEPTAVIKDYRLFRWSWLVLSVLFIGY ILSEFLPIPISFIAGTIALVFLALALQSHVVNTTKVVKGAPWNIVIFSIGMYLVVFGLKNVGITTLLSHVLVTIAHHGLF TSIMGMGFMSAILSSVMNNMPTVMIDAIAIDQAAVVGIVKEGMIYANVIGSDLGPKMTPIGSLATLLWLHVLSQKGMKIS WWTYIKTGVVITLPVLFITLIGLYITLKWL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-137 | 76 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-131 | 74 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 6e-137 | 73 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 9e-99 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SLGD_00174 | YP_003470449.1 | Arsenic efflux pump protein | BAC0574 | Protein | 5e-136 | 74 |
| SLGD_00174 | YP_003470449.1 | Arsenic efflux pump protein | BAC0575 | Protein | 3e-139 | 74 |
| SLGD_00174 | YP_003470449.1 | Arsenic efflux pump protein | BAC0576 | Protein | 1e-99 | 59 |
| SLGD_00174 | YP_003470449.1 | Arsenic efflux pump protein | BAC0578 | Protein | 9e-100 | 59 |
| SLGD_00174 | YP_003470449.1 | Arsenic efflux pump protein | BAC0577 | Protein | 2e-96 | 58 |
| SLGD_00174 | YP_003470449.1 | Arsenic efflux pump protein | BAC0031 | Protein | 5e-97 | 58 |
