Gene Information

Name : SLGD_01509 (SLGD_01509)
Accession : YP_003471727.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : response regulator ArlR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1552464 - 1553123 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAATATTTTAATTGTCGAAGATGAACAAAATTTAGCTCGTTTTCTAGAGCTGGAATTAACGCATGAAAATTATAA
AGTGGACATAGAGAATGATGGGCAAAGTGGTTTAGATAAAGCGTTAACCAAAACATATGACTTGATTATATTAGATATAA
TGTTGCCTCATATTAATGGTTTAGAAATCTGTAGAAGAATTCGTCAGCAATACACGACACCCATAATTATTATTACAGCA
AAGAGTGAAACGATGGATAAAGTAACTGGCTTGGATTATGGGGCAGATGATTATATTGTAAAACCATTTGAAATTGAAGA
ATTATTTGCTCGAATACGAGCGATTTTACGCAGACAACCCCAGAAAGATGTTATCGATATTAATGGTATTATTATTGATA
AAAATGCTTTTGAAGTAACCGTGGACGGGACACAACTAGATTTAACTAAAACAGAATATGATCTTTTGTATGTTCTTGCA
GAAAATAGGAATCATGTCTTGCAACGCGAACAAATACTTGATCATGTATGGGGATATGATAGTGAAGTTGAAACGAATGT
TGTAGATGTTTACATCAGATATTTAAGAAATAAGTTAAAGCCTTTTAATAAAGAAAGAACGATTGAAACAGTCCGAGGCG
TAGGATATGTGATACGATGA

Protein sequence : 
MANILIVEDEQNLARFLELELTHENYKVDIENDGQSGLDKALTKTYDLIILDIMLPHINGLEICRRIRQQYTTPIIIITA
KSETMDKVTGLDYGADDYIVKPFEIEELFARIRAILRRQPQKDVIDINGIIIDKNAFEVTVDGTQLDLTKTEYDLLYVLA
ENRNHVLQREQILDHVWGYDSEVETNVVDVYIRYLRNKLKPFNKERTIETVRGVGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-36 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-35 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-31 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_01509 YP_003471727.1 response regulator ArlR AE015929.1.gene1106. Protein 2e-84 87
SLGD_01509 YP_003471727.1 response regulator ArlR NC_007622.3794948.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR NC_003923.1003417.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR NC_013450.8614146.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR NC_002951.3238224.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR NC_007793.3914065.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR NC_002758.1121390.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR NC_010079.5776364.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR NC_002952.2859858.p0 Protein 2e-86 83
SLGD_01509 YP_003471727.1 response regulator ArlR HE999704.1.gene1528. Protein 2e-51 56
SLGD_01509 YP_003471727.1 response regulator ArlR BAC0308 Protein 3e-36 43
SLGD_01509 YP_003471727.1 response regulator ArlR NC_014475.1.orf0.gen Protein 2e-33 42
SLGD_01509 YP_003471727.1 response regulator ArlR NC_005054.2598277.p0 Protein 2e-33 42
SLGD_01509 YP_003471727.1 response regulator ArlR DQ212986.1.gene4.p01 Protein 8e-33 42
SLGD_01509 YP_003471727.1 response regulator ArlR BAC0125 Protein 4e-38 42
SLGD_01509 YP_003471727.1 response regulator ArlR AF155139.2.orf0.gene Protein 1e-33 42
SLGD_01509 YP_003471727.1 response regulator ArlR FJ349556.1.orf0.gene Protein 6e-34 42
SLGD_01509 YP_003471727.1 response regulator ArlR BAC0197 Protein 5e-36 42
SLGD_01509 YP_003471727.1 response regulator ArlR NC_002952.2859905.p0 Protein 3e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_002758.1121668.p0 Protein 2e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_009641.5332272.p0 Protein 2e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_013450.8614421.p0 Protein 2e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_007622.3794472.p0 Protein 3e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_007793.3914279.p0 Protein 2e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_002745.1124361.p0 Protein 2e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_009782.5559369.p0 Protein 2e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR NC_002951.3237708.p0 Protein 2e-36 41
SLGD_01509 YP_003471727.1 response regulator ArlR AF253562.2.orf0.gene Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_01509 YP_003471727.1 response regulator ArlR VFG0596 Protein 2e-36 44
SLGD_01509 YP_003471727.1 response regulator ArlR VFG1563 Protein 2e-32 42
SLGD_01509 YP_003471727.1 response regulator ArlR VFG1702 Protein 1e-31 42
SLGD_01509 YP_003471727.1 response regulator ArlR VFG1389 Protein 1e-37 42