Gene Information

Name : SLGD_01236 (SLGD_01236)
Accession : YP_003471454.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Resistance
Product : Alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1274695 - 1275405 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence :
ATGTCACAAAAAATTTTAGTGGTAGATGACGAGCAATCAATCGTAACATTACTAAAATACAACTTAGAAACGGCAGGATA
TATCGTCGAAGTCGCATATGACGGTGAAGAAGCACTAGAAAAGGTAGAAAAAGTACAACCAGATTTAATTGTACTGGATG
TTATGTTACCTAAAAAAGATGGAATTGAAGTATGTAAGACGATTCGTTCAGACAAAAACTTAGTTCCTATTTTAATGTTA
ACAGCTAAAGATGATGAATTCGATCGTGTTTTAGGCTTGGAATTAGGCGCTGATGATTATATGACAAAACCGTTTTCACC
TAGAGAAGTAGTTGCAAGGGTTAAAGCAATTTTAAGACGTTCTCAGTTTGTTAATGAAGCTGCAAATGATGCAGCAAACG
AAGAAGATATTTTAATTGAAAATATACGCATTCGTCCAGAATTTTTTGAAGTTTATAAAGATGATGAATTATTAGAACTG
ACACCTAAAGAATTTGAACTTTTACTCTACCTTATTGAACGACAAGGAAGAGTTATTACTAGAGAACACATGCTTAATTC
AGTTTGGAATTATGAATTTGCTGGTGATTCTAGAATTGTGGATGTACATATTAGTCATTTAAGAGATAAATTAGAAGAAA
ATCCTAAACAACCAAAATTGATTAAGACGGTTAGAGGTTTAGGTTATAAATTGGAGCGTCCTAAAGCTTAA

Protein sequence :
MSQKILVVDDEQSIVTLLKYNLETAGYIVEVAYDGEEALEKVEKVQPDLIVLDVMLPKKDGIEVCKTIRSDKNLVPILML
TAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRRSQFVNEAANDAANEEDILIENIRIRPEFFEVYKDDELLEL
TPKEFELLLYLIERQGRVITREHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPKLIKTVRGLGYKLERPKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 9e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002952.2859905.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_003923.1003749.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002758.1121668.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007622.3794472.p0 Protein 8e-94 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_009641.5332272.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_013450.8614421.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007793.3914279.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002745.1124361.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_009782.5559369.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002951.3237708.p0 Protein 1e-93 85
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP HE999704.1.gene2815. Protein 6e-65 61
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP AE016830.1.gene1681. Protein 2e-56 53
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_012469.1.7685629. Protein 1e-51 53
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_012469.1.7686381. Protein 6e-56 50
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP AF162694.1.orf4.gene Protein 5e-41 45
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP AE000516.2.gene3505. Protein 1e-40 45
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP004022.1.gene3215. Protein 9e-38 45
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_014475.1.orf0.gen Protein 8e-42 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_005054.2598277.p0 Protein 8e-42 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001485.1.gene721.p Protein 4e-35 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP FJ349556.1.orf0.gene Protein 2e-38 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002695.1.915041.p Protein 1e-34 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0533 Protein 1e-34 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000034.1.gene3834. Protein 1e-34 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000647.1.gene4257. Protein 1e-34 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001138.1.gene4273. Protein 6e-35 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001918.1.gene5135. Protein 4e-30 44
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP DQ212986.1.gene4.p01 Protein 3e-40 43
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001918.1.gene3444. Protein 2e-35 43
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP AF130997.1.orf0.gene Protein 1e-38 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000675.2.gene1535. Protein 8e-36 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP EU250284.1.orf4.gene Protein 2e-41 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0197 Protein 3e-33 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP AF155139.2.orf0.gene Protein 8e-38 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_009085.4919120.p0 Protein 2e-26 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001138.1.gene2239. Protein 5e-34 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0039 Protein 3e-35 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000647.1.gene2531. Protein 3e-36 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000034.1.gene2186. Protein 3e-35 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0596 Protein 5e-34 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002695.1.916589.p Protein 2e-35 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_011586.7046392.p0 Protein 3e-28 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_010410.6002907.p0 Protein 3e-28 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP AF310956.2.orf0.gene Protein 4e-33 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0125 Protein 1e-33 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_013450.8614146.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002951.3238224.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007793.3914065.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002758.1121390.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_010079.5776364.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002952.2859858.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007622.3794948.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_003923.1003417.p0 Protein 3e-38 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP AM180355.1.gene1830. Protein 2e-40 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0308 Protein 3e-32 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP HE999704.1.gene1528. Protein 6e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1390 Protein 3e-39 42
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1386 Protein 2e-37 41
SLGD_01236 YP_003471454.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1389 Protein 8e-31 41