Gene Information

Name : SLGD_01232 (SLGD_01232)
Accession : YP_003471450.1
Strain : Staphylococcus lugdunensis HKU09-01
Genome accession: NC_013893
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1268038 - 1269798 bp
Length : 1761 bp
Strand : +
Note : -

DNA sequence :
ATGAGAAAGACTAAAATAGTATGTACAATAGGACCTGCATCTGAATCAGAAGAAATGTTAGAAAAATTAATGAAAGCTGG
CATGAATGTTGCCCGTTTGAATTTTTCTCATGGCAGTCATGAAGAACATAAAGCACGAATTGATACGATTCGAAAAGTAG
CGAAAAAACTTGGGAAAACAATTGGAATCTTACTTGATACTAAGGGTCCTGAAATTCGTACTCATGACATGAAAGATGGC
CTAATTATGTTAGAAAAAGGCAAAGAAGTTATTGTGAGTATGACTCAAGTAGAAGGAACACCAGAAAAATTTTCAGTAAC
TTATGAAAATTTAATTAATGATGTTCAAGTAGGTTCATACATTTTATTAGACGATGGCTTAGTTGAACTTGAAGTTAAGG
AAATAGATAAAGCTAACGGCGAAGTTAGATGTGAAATTTTAAATACAGGTGAATTAAAAAATAAAAAAGGTGTCAATCTC
CCTGGTGTCAGAGTAAACTTACCTGGTATTACAGATAAAGATGCAGATGATATTTTATTTGGAATTAAAGAAGATGTCGA
TTATATCGCTGCAAGTTTTGTTCGACGTCCAAGCGATGTTTTAGATATTCGTGAAATTTTAGAAAGAGAAAACAATCATA
ATATTACCATCTTCCCTAAAATTGAAAACCAAGAAGGTATTGACAATATTGAAGAAATATTAGAAGTATCTGACGGATTA
ATGGTAGCACGTGGAGACATGGGTGTTGAAATTCCACCAGAATCTGTACCAATTGTTCAAAAAGACTTAATTAGAAAATG
TAATAAATTAGGAAAACCTGTTATTACTGCTACGCAAATGTTAGACTCTATGCAACGTAATCCACGTGCAACTCGTGCTG
AAGCAAGTGACGTAGCTAATGCCATTTATGATGGAACGGATGCCGTAATGTTATCAGGTGAAACAGCTGCTGGTTTATAC
CCAGAAGAAGCAGTGAAAACAATGAGAAATATTGCTGTATCTGCTGAAGCTGCGCAAGACTACAAAAAATTATTATCAGA
TCGTACAAAACTAGTTGAAACATCATTTGTTAACGCGATTGGGGTTTCTGTAGCACATACAGCTCTTAATTTAAACGTTA
AAGCTATCGTTGCAGCTACTGAAAGTGGTTCGACTGCAGTAACAATTTCTAAATATCGACCACATTCAGATATCATTGCT
GTTACACCAAGTGCACATACAGCTCGCCAATTAGCACTTGTTTGGGGTGCATATCCAGTTATTAAAAAAGGTCGTAAAAC
CACTGATGATTTATTAAATAACTCTGTCGCAACTGCTGTTGAAACAGGACGCGTAACAAATGGGGATTTAATCATTATTA
CTGCTGGTGTTCCAACTGGTGAAAAAGGTACAACTAATATGATGAAGTTACATCTTGTTGGTGATGAAATTGCAAAAGGT
CAAGGTGTTGGCCGTGAATCAGTTGTAGGTCAATCTGTTGTTGCAGATGATGCCAGCGATTTAGAAGGAAAAGACTTAAG
CAATTCAATTATTATTACTACTTCAGTTGACGAAACTTTAGTACCATACATTGAAAAAGCAGCTGGCTTAATCACTGAAG
AAAACGGTATTACTTCTCCAAGTGCTATTGTTGGTTTAGAAAAAGGCATTCCAACGATTGTTGGCGTAGAACATGCTACT
AAAGAAATTAAAGATGGTATATTAATTACAGTTGATGCTGCACAAGGAAAAATCTTTGAAGGCTATGCAAACGTACTTTA
A

Protein sequence :
MRKTKIVCTIGPASESEEMLEKLMKAGMNVARLNFSHGSHEEHKARIDTIRKVAKKLGKTIGILLDTKGPEIRTHDMKDG
LIMLEKGKEVIVSMTQVEGTPEKFSVTYENLINDVQVGSYILLDDGLVELEVKEIDKANGEVRCEILNTGELKNKKGVNL
PGVRVNLPGITDKDADDILFGIKEDVDYIAASFVRRPSDVLDIREILERENNHNITIFPKIENQEGIDNIEEILEVSDGL
MVARGDMGVEIPPESVPIVQKDLIRKCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLY
PEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSFVNAIGVSVAHTALNLNVKAIVAATESGSTAVTISKYRPHSDIIA
VTPSAHTARQLALVWGAYPVIKKGRKTTDDLLNNSVATAVETGRVTNGDLIIITAGVPTGEKGTTNMMKLHLVGDEIAKG
QGVGRESVVGQSVVADDASDLEGKDLSNSIIITTSVDETLVPYIEKAAGLITEENGITSPSAIVGLEKGIPTIVGVEHAT
KEIKDGILITVDAAQGKIFEGYANVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-96 49
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-96 49
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-96 49
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-95 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SLGD_01232 YP_003471450.1 pyruvate kinase VFG0479 Protein 3e-96 49