Gene Information

Name : pagC (XBJ1_0486)
Accession : YP_003466431.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : Virulence membrane protein pagC
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 485086 - 485673 bp
Length : 588 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type f : factor

DNA sequence : 
ATGGTAATAAAAAAAGCACTTCTTGCTACCTTAGCCGTCTCTGGCGTTATGTATGGCTCATTGGCTTATGCGGATTCGCA
TACTGTCACTGTAGGTTATGCGCAAAGTAAGGTTCAGAATTTTAAAGATATTCGCGGGGTAAATTTGCATTACCGTTATG
AATGGGATTCTCCAGTCAGTATTATTGGATCGTTTACTCATATGAAGGGCGATAGAGATTATAAATTTAGTTTTAAACAT
AATGGCAAGAATTATACTGGAGAGGATAGTCTTGATATGAAATATTATTCACTAATGGCAGGCCCTGCTTACCGCATCAA
TGACTATCTAAGTGTATATGGTTTGCTTGGTTTTGCACATTCAAAAGCTGATGCAACTGAAGGGGCTTATCATCTACGCA
ACACAGTCGAAGTTGAGGCCAGTAAAATGAATAGAAAATCGACCAACTTCGCCTATGGTGCTGGTGTAGAAGTTAATCCG
ATACAAAGTCTCAGCCTTTATGCCGGTTATGAAGGCGCATCAGTAAAATATAATGATAACCGTGAGGAAATTAACGGGTT
TAATCTTGGTGTAGGTTATCGTTTTTAA

Protein sequence : 
MVIKKALLATLAVSGVMYGSLAYADSHTVTVGYAQSKVQNFKDIRGVNLHYRYEWDSPVSIIGSFTHMKGDRDYKFSFKH
NGKNYTGEDSLDMKYYSLMAGPAYRINDYLSVYGLLGFAHSKADATEGAYHLRNTVEVEASKMNRKSTNFAYGAGVEVNP
IQSLSLYAGYEGASVKYNDNREEINGFNLGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 8e-36 51
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 3e-36 51
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 9e-37 51
pagC AGI37340.1 PagC Virulence OI-122 Protein 2e-27 48
pagC AGI37347.1 PagC Virulence OI-122 Protein 2e-27 48
pagC AGI37341.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37349.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37348.1 PagC Virulence OI-122 Protein 6e-28 47
pagC AGI37352.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37351.1 PagC Virulence OI-122 Protein 4e-28 47
pagC AGI37337.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37342.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37344.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37346.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37343.1 PagC Virulence OI-122 Protein 1e-26 47
pagC AGI37350.1 PagC Virulence OI-122 Protein 7e-27 47
pagC AGI37353.1 PagC Virulence OI-122 Protein 1e-26 47
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 8e-29 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_003466431.1 Virulence membrane protein pagC VFG0442 Protein 1e-23 41