Gene Information

Name : ugd (XBJ1_4328)
Accession : YP_003470189.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 4146291 - 4147457 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence : 
ATGGATATAACAATAGCAGGTATAGGATACGTGGGCTTATCTAACGGAATTCTTTTATCACAAAAACATAAAGTTATTGC
GTTAGATATTAGCGAAGAAAAAGTCAATCTTATAAATAAAAAAAAATCTCCAGTTGTCGATAAAGAAATAGAATTCTATA
TAAAAGAAAAAAAATTAGACCTCATTGCAACACTTGATAAAAAACTTGCATATGAAAACGCTGACTTTGTTATCATTGCA
ACACCTACAGATTACGACCCTAAAACTAACTATTTTAATATAAAATCTGTCGAATCTGTCATAGAAGATGTTCTGTATTA
TAATCCCACAGCTATAATGATAATTAAATCAACAATTCCTGTTGGTTTTACGAAACAGATGAGAGAAAAATATAATACGG
ACAATATTATTTTCTCTCCAGAATTTCTCAGAGAAGGACGCGCATTATACGACAATTTATATCCATCTAGAATTGTTATT
GGCGAAAAATCTGAAAGGGCACAATTATTTTCTGATCTTCTACTCGAAGGAGCTATAAAAAAAGACATTCCTATTCTTTT
TACTGAATCAACTGAAGCAGAAGCAATAAAATTATTTTCAAATACATATTTAGCTATGCGAGTAGCATATTTTAACGAAC
TTGATAGTTATGCAGAAATCAATGAATTAAACACTCGCCAAATTATCGAAGGTGTTTCTTTAGATCCTAGAATTGGTAAT
CACTATAATAATCCATCATTTGGATATGGTGGCTATTGCTTACCTAAAGACACTAAACAATTACTTGCTAACTATCAAAA
AGTACCAAATAATATTATTAATGCAATTGTGGAAGCTAATCGTACACGCAAAGATTTTATCGCTGATTCAATCCTTAGCA
AAAATCCTAAAATTGTCGGTGTTTATCGATTAATTATGAAATCAAACTCTGACAATTTTAGAGCATCTTCAATTCAGGGG
ATCATGAAAAGAATCAAAGCTAAAGGCATTGAAGTTGTTATATTTGAACCAGAAATGACAGATGAGTATTTTTTCAACTC
TAAACTTATTCGCGATTTAGAATATTTTAAATCTATATCAGATATAATTATCTCTAATCGCATGTCTGAAGAACTCAAGG
ATGTGAAAGAAAAAGTGTATACGCGAGATTTATTTGGTAACGATTAA

Protein sequence : 
MDITIAGIGYVGLSNGILLSQKHKVIALDISEEKVNLINKKKSPVVDKEIEFYIKEKKLDLIATLDKKLAYENADFVIIA
TPTDYDPKTNYFNIKSVESVIEDVLYYNPTAIMIIKSTIPVGFTKQMREKYNTDNIIFSPEFLREGRALYDNLYPSRIVI
GEKSERAQLFSDLLLEGAIKKDIPILFTESTEAEAIKLFSNTYLAMRVAYFNELDSYAEINELNTRQIIEGVSLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQKVPNNIINAIVEANRTRKDFIADSILSKNPKIVGVYRLIMKSNSDNFRASSIQG
IMKRIKAKGIEVVIFEPEMTDEYFFNSKLIRDLEYFKSISDIIISNRMSEELKDVKEKVYTRDLFGND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-90 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_003470189.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 3e-98 54