Gene Information

Name : yrbH (XBJ1_3828)
Accession : YP_003469708.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : isomerase with phosphosugar-binding domain
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 3706612 - 3707598 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence :
ATGACGTGGGAAGTAGAAATGTCTAAGATAGATTTTCAACAATCAGGTAAAAAAGTATTACAGGTCGAACTCGACGGATT
GGCAGAACTGGAACAATATATTAATGAAGATTTCAGCCGAGCCTGTGAGTTGATGTTTGGTTGTGAAGGAAAAATCATTG
TCATGGGGATGGGAAAATCCGGTCATATTGGACGAAAAATTGCCGCCACATTTGCCAGTACTGGCACGCCCTCTTTCTTT
GTCCACCCCGGTGAAGCCAGCCACGGTGATCTCGGTATGGTGACATCAAAAGACATCGTGCTGACAATCTCCAATTCCGG
TGAATCCAATGAAATCGTTGCCTTGATCCCCGTCCTCAAACGGCAAAAAGTTCCGCTTATCTGTATGACAAACAACCCAA
ACAGTAGCATGGGGAAAGCTGCCGATATCCATCTGTGCATCAAAACACCACAGGAAGCCTGCCCGCTTGGATTAGCGCCC
ACCACTAGCACGACAGCAACACTTGTTATGGGAGATGCTCTGGCCGTTGCGCTCTTACAAGCTCGAGGTTTTACCGCTGA
AGACTTTGCCCTTTCCCATCCGGGTGGCACGCTGGGACGCAAACTTCTGTTACTGACCAGTGACTTAATGACCATCGGTG
ATGATATTCCCCGTGTTCCTTATACCGCGACACTACGTGAAGCCTTGGTTGAAATCACCCGCAAGAAACTGGGAATGACC
GTCATCTGCGATGACGATATGCAGATCAAAGGAATTTTCACTGACGGGGATTTGCGCCGTGTTTTCGATATGGGAATCGA
TTTAAACCATGCAAACATCTCTGATGTTATGACTATCGGCGGTGTCCGCATCAAGCCCCATACACTGGCCGTTGATGCCC
TGAACCTGATGCAGTCACGCCACATCACGTCCTTGCTGGTCACTGACGGTGACAAATTGCTCGGCGTACTGCATATGCAC
GACCTCTTACAGGCGGGTGTAGTATAA

Protein sequence :
MTWEVEMSKIDFQQSGKKVLQVELDGLAELEQYINEDFSRACELMFGCEGKIIVMGMGKSGHIGRKIAATFASTGTPSFF
VHPGEASHGDLGMVTSKDIVLTISNSGESNEIVALIPVLKRQKVPLICMTNNPNSSMGKAADIHLCIKTPQEACPLGLAP
TTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGTLGRKLLLLTSDLMTIGDDIPRVPYTATLREALVEITRKKLGMT
VICDDDMQIKGIFTDGDLRRVFDMGIDLNHANISDVMTIGGVRIKPHTLAVDALNLMQSRHITSLLVTDGDKLLGVLHMH
DLLQAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-45 43
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-45 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 3e-45 43