Gene Information

Name : XBJ1_3595 (XBJ1_3595)
Accession : YP_003469477.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : insertion element IS1 2/3 protein insB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 3491457 - 3491960 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :
ATGTCGGGCGACAGCACGAGTGATGGGGATTGGCCTGAATACCGTACTTCGGCATTTAAAAAACTCAAACCCAAATCGGT
AACAGAAGCGATTAAACCTGGCACTGAAGTGATTGTCTGCTGCGAAATGGATGAACAATGGTCTTACGTAAAGTCAAAGA
AGCCGCCTCGTTGGCTCTTTTATGCCGACGACAGGATAAGGCGAAAAGTGATCGCCCATGTTTTTGGTCCAAGAACAAAA
AAGACATTAATGCGCCTATTAGCTTTACTGGCACCTTTCAACATTATTATTTACATGACAGATAGCTGGAAAAGTTACGA
AAAAGCACTCGCAGGGAAACGCCATGTGGCCAGCAAGCGTTATACCCAACGCATAGAGAGGCATAACCTGAATCTTCGTC
AACATTTGGCAAGACTGACTCGCAAAACATTGTCTTTTTCAAAATCCATAGAAATGCATGACAGAATTATAGGATATTAT
CTGAACATTCATCACTATCAATAA

Protein sequence :
MSGDSTSDGDWPEYRTSAFKKLKPKSVTEAIKPGTEVIVCCEMDEQWSYVKSKKPPRWLFYADDRIRRKVIAHVFGPRTK
KTLMRLLALLAPFNIIIYMTDSWKSYEKALAGKRHVASKRYTQRIERHNLNLRQHLARLTRKTLSFSKSIEMHDRIIGYY
LNIHHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 8e-43 70
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 3e-51 66
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 3e-51 66
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-52 65
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-51 65
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 4e-51 65
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-52 65
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-52 65
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-52 65
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 6e-50 64
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 7e-51 64
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 1e-37 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_3595 YP_003469477.1 insertion element IS1 2/3 protein insB VFG0612 Protein 2e-50 64