Gene Information

Name : deoA (XBJ1_3541)
Accession : YP_003469423.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 3452342 - 3453676 bp
Length : 1335 bp
Strand : -
Note : -

DNA sequence :
TTGTTTCTGGCACAGGAAATTATCCGCAAAAAACGGGACGGTCACCGGTTGAATGAAGAAGAGATCCGTTTCTTTATTAA
CGGGGTTCGTGATAATACCGTTTCTGAAGGACAGATTGCTGCACTGGCGATGACCATTTATTTCCATGATATGACGATGG
AAGAGCGTGTGGCTCTGACTTTGGCAATGCGCGATTCCGGTACGGTTCTGGATTGGAAAAAATTGAATTTGCATGGCCCG
ATCGTAGATAAACATTCGACGGGGGGTGTCGGCGATGTGACTTCTCTGATGCTGGGTCCGATGGTAGCCGCCTGTGGGGG
TTACGTACCGATGATATCAGGACGGGGTTTGGGGCATACCGGGGGAACACTGGATAAATTGGAATCCATCCCCGGCTTTG
ACATCTTTCCTGATGAACAGCGCTTCCGTGACATTATCCGAGATGTAGGTGTTGCGATTATCGGGCAGACTAACTTGCTG
GCACCTGCGGACAAACGTTTTTATGCGACTCGTGATATCACTGCTACCGTTGATTCCATCCCTTTAATTACGGCCTCTAT
TTTAGGCAAAAAACTGGCTGAGGGATTGGATGCGCTGGTTATGGATGTGAAAGTGGGCTCTGGAGCATTCATGCCGACTT
ATGAACAGTCAGAACAACTGGCAGAATCCATCGTTGGCGTTGCTAATAGTGCAGGTTGCAAGACAACCGCGTTGTTGACG
GATATGAATCAAGTTTTGGCATCCAGTGCCGGTAATGCGCTAGAAGTGCGTGAAGCCGTTCAATTTCTGACTGGAGAATA
CCGTAATCCTCGGTTATTTGAAGTCACTATGGCATTGTCTGCGGAAATGCTGGTATCGGGTAATCTGGCGGCTGATCGTG
CCGAAGCACGCCGTAAATTGCAGGCAGTGCTGGACAATGGCAAAGCGGCTGAAACCTTTGAGCGTATGGTAGCAGCACAA
AAAGGCCCGATCGATTTTGTCGAAAATTATGCTCGTTATCTACCGACTGCCCCTTTTAGCAAACCGGTGTTTGCCGGGCA
AAATGGCATAATTACTGAAATGGATACGCGGGCATTGGGAATGTCTGTGGTTGCATTGGGAGGCGGTCGTCGCAAGGCCA
CTGACCCTATTAATTACAGTGTGGGGCTGAGTGATATCGTTGCACTTGGAGCAGAAGTGAACGCAGATACTCCTCTGGCA
ATGATTTATGCCAATAGTGAAAATGACTGGCAGGAAGCGGCGGAGGTCGTACGTAAGTCCATCGTTTTGGGAATTGATGT
GAATACCGAAACAAAAGCCGCCACACGGATGGTTTACCGCCATATTGATGGCTAA

Protein sequence :
MFLAQEIIRKKRDGHRLNEEEIRFFINGVRDNTVSEGQIAALAMTIYFHDMTMEERVALTLAMRDSGTVLDWKKLNLHGP
IVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLESIPGFDIFPDEQRFRDIIRDVGVAIIGQTNLL
APADKRFYATRDITATVDSIPLITASILGKKLAEGLDALVMDVKVGSGAFMPTYEQSEQLAESIVGVANSAGCKTTALLT
DMNQVLASSAGNALEVREAVQFLTGEYRNPRLFEVTMALSAEMLVSGNLAADRAEARRKLQAVLDNGKAAETFERMVAAQ
KGPIDFVENYARYLPTAPFSKPVFAGQNGIITEMDTRALGMSVVALGGGRRKATDPINYSVGLSDIVALGAEVNADTPLA
MIYANSENDWQEAAEVVRKSIVLGIDVNTETKAATRMVYRHIDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 2e-65 42