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Name : XBJ1_3537 (XBJ1_3537) Accession : YP_003469419.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Virulence Product : Usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3445706 - 3448345 bp Length : 2640 bp Strand : - Note : - DNA sequence : ATGAATCATCATTTTTCAGCTATTAATATAAAAAACAACATTAATAAAGAGAACGTCGCTAATAAAAAAACAGTAGATAA TAAAGCGAAAGTAGTTAATAGAATAAAACCAGTCCACTTAAAAAATAGAATTAAACCTCTTTCGGCATTGGTTTTGTTTG CACTGGCGGGTATGCAGACCGCATATTCTAATCCATCAATTGAATTCAATATCGACGCGCTGGATGTCGGTGAACGTGCC AATATCGATTTGGATAAATTTTCCCGAGCAGGCTATATCATGCCCGGTAACTATATTATGGGTGTCCGGATGAATAAAAA TGAATTTCCGGACATGTATTCGATTGATTTTACCTCGCAACCCGATGATCCCAAAAACAGCGAAGCCTGCATATCCCCTG AACTGGTGAAGCAAATAGCATTGAAACAGGAGTGGGCAGGAAAGTTAGGTTGGCAGAATGATGGGAAATGTCTTGATCTC AGTAGCTTGCCAGGTATGTCAGCCAGAGGAGAGCTGGCAACTTATACTCTGTATTTAATTGTTCCACAGATCTATTTGGA ATATGACCTACCGGATTGGGACCCGCCTTCCCGCTGGGATAATGGTGTGCCTGGGGTGCTGTTTGACTATAACGTCAATG CGCAGACGTCTAAACCTACTCATGGCAGCAGCAATCAACAGGTGAGTGCCAACGGAACGGCGGGTATGAATGCGGGAGCA TGGCGTTTTCGGGCTGATTGGCAGGCTAATTATAACCACTCGAAAACCAAGGATAATAAGCAGGGCGCTTCTGGAGAAAG AGAGCGTGATTGGAATTGGAGCCGTTACTACATGTACCGCGCCATACCTCACCTTCAGGCTCAATTGACTTTTGGGGAAG ATTACCTGAATTCCAATATTTTCGACAGTTTCCGTTATACGGGGTTGAGTCTGGTCACTGATGACAATATGTTGCCGCCA AACTTGCGTGGATACGCCCCCGAAGTTTCCGGAGTCGCGAGAACCAATGCTAAGGTGACAGTGCGTCAGCAGGGGCGAGT GTTGTATGAAACTCAGGTCGCTCCCGGCCCGTTCCGCATTCAGGATCTCAGTGATGCAGTAACGGGTAATCTGGATGTCA GAGTAGAAGAACAGGATGGTGGCATACAGGAATTTCAGGTTAATACGGCTACGGTTCCTTATCTGACTCGCCCCGGACGC GTGCAGTATAAATTGGTCGGTGGGCAATCGACCAATGACAAACATCGTCGGGAAGGACCCGCATTTGGATTGGGTGAATT TTCCTGGGGAATTAATAACGGTTGGTCATTGTATGGTGGATTGCTGGGAGCAGGGGATTACAACGCCTTGTCTCTGGGGA TCGGCCGTGACTTGATGATGTTTGGTGCGCTGTCTTTTGACATCACGGAATCAAGGGCAAGAATACCGAAAGAGAATAAA ACCTTTACGGGTGGTTCATATCGCCTCAGTTATTCGAAACGTTTCGAGCAATACAATAGTCAGGTGACATTCGCGGGCTA TCGTTTCTCCGAGCGTAATTTTATGAGTATGGCGCAATACATCGACCGCCGTTACCGCGATGTTAACTCTGACAATGGAA AAGAACTTTATACCCTGATTTTCAGTAAGCAATTTAAGGATCTTGGTCTTAATGCCCATATTAACTATAGCCATCAAACC TACTGGAACAGGCCAACAAATGATCGCTATAACATATCACTGTCCAAATATTTGGATATTGGGCGTTATAAAAATATCAA TGTGAACTTATCCGCCTATCGCAACAATTTTGACAATAAAAAAGATGATGGCGTGTATCTGAATCTGTCTATTCCGTGGG GAGATAGCGGAACACTTAGCTATAACGGTTTGGCCAATCGTCAGGGTAATTCGCATATGGCTAGTTATTTCAACCGCATT GATGAACGAAATAACTATCGTATCTCTGCGGGTAGCAGCATCGGTGGTAAGGCTGCCGCAGATGGTTATTACACCCATTA TGGTGACAAAACGTTGCTGTCTGCCAGTGCCAGTTATCAGGATGGCGGGCATACCTCCGCAGCACTTGGTCTTCGAGGTG GAGTGACCGTGACAGCAAATGGCGCAGCATTGCATCGTATCAATCTTCCTGGTGCAACTCGCCTGATGGTGGATACGGAA GGGGTTAGTGATGTACCGGTCAGGGGGTTTGGCTCTGTCGTTCATACAAACTACTTTGGTAAGGCAGTGCTAGTGGATGT CAATCACTATTACCGCAATTCTGCAAATATCGATTTAGACCATTTGCCGGATAACGTAGAAGCCCTGCGTTCTGTACAAC AGGCAACCCTGACGGAAGGCGCGATTGGTTATCGGAAGTTCCAGGTAATGTCAGGAATGAAGGCGATGACTGTTATCCGT TTGCCTGATGGTTCATTTCCACCTTTTGGCGCTTCTGTCATGAACACAGCTCAACGCGAAATTGGGATTGTCAGTGATGA TGGGTATGCCTATCTGAGTGGAATGAATGCAGGTGAGAAATTGCAGGTGCATTGGAATGGCGGGGCTCAGTGTGAAATCA CCGTACCGCAGGAAATATCCGAAGCCTCTTTGACTTCATTCTTGCTACCTTGTCAGTTTTTAAAAGGTGAACATCAGTAA Protein sequence : MNHHFSAINIKNNINKENVANKKTVDNKAKVVNRIKPVHLKNRIKPLSALVLFALAGMQTAYSNPSIEFNIDALDVGERA NIDLDKFSRAGYIMPGNYIMGVRMNKNEFPDMYSIDFTSQPDDPKNSEACISPELVKQIALKQEWAGKLGWQNDGKCLDL SSLPGMSARGELATYTLYLIVPQIYLEYDLPDWDPPSRWDNGVPGVLFDYNVNAQTSKPTHGSSNQQVSANGTAGMNAGA WRFRADWQANYNHSKTKDNKQGASGERERDWNWSRYYMYRAIPHLQAQLTFGEDYLNSNIFDSFRYTGLSLVTDDNMLPP NLRGYAPEVSGVARTNAKVTVRQQGRVLYETQVAPGPFRIQDLSDAVTGNLDVRVEEQDGGIQEFQVNTATVPYLTRPGR VQYKLVGGQSTNDKHRREGPAFGLGEFSWGINNGWSLYGGLLGAGDYNALSLGIGRDLMMFGALSFDITESRARIPKENK TFTGGSYRLSYSKRFEQYNSQVTFAGYRFSERNFMSMAQYIDRRYRDVNSDNGKELYTLIFSKQFKDLGLNAHINYSHQT YWNRPTNDRYNISLSKYLDIGRYKNINVNLSAYRNNFDNKKDDGVYLNLSIPWGDSGTLSYNGLANRQGNSHMASYFNRI DERNNYRISAGSSIGGKAAADGYYTHYGDKTLLSASASYQDGGHTSAALGLRGGVTVTANGAALHRINLPGATRLMVDTE GVSDVPVRGFGSVVHTNYFGKAVLVDVNHYYRNSANIDLDHLPDNVEALRSVQQATLTEGAIGYRKFQVMSGMKAMTVIR LPDGSFPPFGASVMNTAQREIGIVSDDGYAYLSGMNAGEKLQVHWNGGAQCEITVPQEISEASLTSFLLPCQFLKGEHQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-180 | 47 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 5e-167 | 45 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 6e-166 | 45 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 4e-166 | 45 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 5e-167 | 45 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 6e-167 | 45 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 5e-167 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XBJ1_3537 | YP_003469419.1 | Usher protein | VFG1548 | Protein | 3e-167 | 45 |
| XBJ1_3537 | YP_003469419.1 | Usher protein | VFG0884 | Protein | 2e-167 | 45 |
| XBJ1_3537 | YP_003469419.1 | Usher protein | VFG0895 | Protein | 3e-167 | 45 |
