Gene Information

Name : XBJ1_3536 (XBJ1_3536)
Accession : YP_003469418.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3444822 - 3445559 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence :
ATGGTAACCGCTCTAACGTTGACAAGCCTGATGCCCGCTTATCAGGCAATGGCTGCGATGGCGCTGGATCGTACCCGGGT
AATTTTTAATGGGGATGTCAAGTCTGTTAGCTTGAATATCGAAAACCAGCATGTCGATTTACCTTATCTGGCACAGGCAT
GGATTGAAGATGATAAGGGGAATAAGATTAACGGTCCGCTCGTGGTTGTTCCTCCTGTACAGCGTGTTGAAGCCGGAGCG
AAGAGCCAAGTCAAAATTCAGACATTACCGACAATAGCCGAATTGCCTCAAGACAGAGAAAGCCTGTTCTATTTCAATTT
GCGTGAAATTCCACCACGCAGCAATAAACCTAATGTGCTGCAAATTGCGTTACAAACCCGGGTTAAATTGTTCTATCGCC
CGGAAGCCGTCGTCGCTCGCCGTATCGACCTTGATAACCCATGGCAGGAGAAGCTCACTTTAACCCGTCAGGGAAATCAA
TATCTGGTAAATAACCCGACATCTTATTACGTCACCATTTCGGAAGCCTCTAATAAGGTTAATGGTAAGAATATCGATGG
TTTTCAACCTTTGATGCTGGCACCCAGAAGTAGTGAAAAACTCGGGGCAGACCTCAGTGCGCTGGGCAATAAGCCAGTAC
TGACCTATGTCAATGATTATGGCGGACGTCCACAGCTGACATTCAGCTGTAATGGTGATACCTGCACGGTTGCGAAAACC
ACAGTTGAAGAAAACTGA

Protein sequence :
MVTALTLTSLMPAYQAMAAMALDRTRVIFNGDVKSVSLNIENQHVDLPYLAQAWIEDDKGNKINGPLVVVPPVQRVEAGA
KSQVKIQTLPTIAELPQDRESLFYFNLREIPPRSNKPNVLQIALQTRVKLFYRPEAVVARRIDLDNPWQEKLTLTRQGNQ
YLVNNPTSYYVTISEASNKVNGKNIDGFQPLMLAPRSSEKLGADLSALGNKPVLTYVNDYGGRPQLTFSCNGDTCTVAKT
TVEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 7e-59 53
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 1e-58 53
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 1e-58 53
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 1e-58 53
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 1e-58 53
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 1e-58 53
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 1e-52 52
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 9e-60 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_3536 YP_003469418.1 chaperone VFG1547 Protein 4e-59 53
XBJ1_3536 YP_003469418.1 chaperone VFG0896 Protein 6e-59 53
XBJ1_3536 YP_003469418.1 chaperone VFG0885 Protein 6e-53 52