Gene Information

Name : metB (XBJ1_3500)
Accession : YP_003469382.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase, PLP-dependent
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 3411392 - 3412552 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence :
ATGACTACAACTAAGTTTGATACAAAAAGCGTTCATGCAGGCTATGTCCCCGATCATACCGGCGCTGTCATGCCCGCAAT
TTATGCCACTTCCACTTATGCACAACCTGCTCCCGGCCAGCATACAGGCTATGAGTACTCTCGCAGTGGTAACCCAACCC
GCGATGCCCTGGAGAGTGCTATTGCTGAATTGGAAAACGGTACGCGTGGCTATGCTTTTGGTTCAGGGCTGGCCGCCAGC
TCTACTATTTTAGAGCTACTGGATAAAGACAGTCACATTATTGCCGTAGATGATCTGTATGGCGGGACTTACCGGTTATT
GGAAAAAGTCCGTCGCCGGACGGCTGGCCTGCGTGTTACGTATGTTGAAGCGGGGAATACTGCTGCACTGGAAGCCGCCA
TTGAGCCTGATACAAAAATGATTTGGGTGGAGACACCAACCAATCCACTGCTGAAACTGGCTGATCTGGCTGCCATTGCT
CAGATCGCCCAGCGTCATAAGATTATCAGCGTAGCGGACAATACTTTTGCATCTCCCTATATCCAGCGCCCTCTTGATTT
AGGTTTTGACATTGTTGTTCACTCAGCAACCAAATATCTGAATGGTCATTCTGATGTTGTCGCGGGTCTTGCCGTGGTGG
GAAGCAATGCTGAACTGGCGGAACAGGTTGCTTTCCTGCAAAACTCCATTGGTGGCATTCTCGATCCTTTCAGCAGTTTT
CTTGTCCTGCGTGGTATACGGACGTTGGCACTGCGTATGGAGCGCCATATCGATAATGCAGAGAAGATTGCACATTGGCT
GGAGCAGCAACCTCAAATAGAGAAAGTATTTTATCCGGGTCTGGCTTCCCATCCTCAGCATGAATTAGCAAAACGTCAGA
TGCAGGGTTTTGGTGGCATGATTTCCGTGGTATTGAAAGGCGATGATGACTATATACGCCGAGTGATTAAGGAACTGAAA
TTATTTACGCTGGCAGAAAGTCTTGGCGGAGTAGAAAGTTTGATTGGCCAGCCATTTACGATGACCCATGCTTCGATTCC
ACTGGAAAAACGTCTGGCATCAGGTATTACACCCCAATTGATCCGTATTTCAGTCGGTATTGAAAATTCAGAAGATTTGA
TTGCCGATTTTGCTCAGGCGCTAGAAAAAGCCAGTCTGTAA

Protein sequence :
MTTTKFDTKSVHAGYVPDHTGAVMPAIYATSTYAQPAPGQHTGYEYSRSGNPTRDALESAIAELENGTRGYAFGSGLAAS
STILELLDKDSHIIAVDDLYGGTYRLLEKVRRRTAGLRVTYVEAGNTAALEAAIEPDTKMIWVETPTNPLLKLADLAAIA
QIAQRHKIISVADNTFASPYIQRPLDLGFDIVVHSATKYLNGHSDVVAGLAVVGSNAELAEQVAFLQNSIGGILDPFSSF
LVLRGIRTLALRMERHIDNAEKIAHWLEQQPQIEKVFYPGLASHPQHELAKRQMQGFGGMISVVLKGDDDYIRRVIKELK
LFTLAESLGGVESLIGQPFTMTHASIPLEKRLASGITPQLIRISVGIENSEDLIADFAQALEKASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-79 52
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-81 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_003469382.1 cystathionine gamma-synthase, PLP-dependent BAC0207 Protein 4e-66 44