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Name : hofB (XBJ1_3460) Accession : YP_003469342.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Virulence Product : integral membrane protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3367630 - 3369165 bp Length : 1536 bp Strand : + Note : - DNA sequence : ATGAGAAACAAGGAAAATGTATTAATGGAAAGGGAAATCAATGAACTGTGTCAACGACATCAGGCCATTATTATAAAAAG AGAGATCCATACCATGACTATTGCCTGTAGCAAATCACCCAATGAAGATTTCATTGCTGCATTACGATTTATTTCTGGCT CAATCATTAATGTAGATATTTGGCCAAAAGCAAAAATAGAATCCATGCTGACACAAGGAAGTTCATTGGTATCTTGTACA GAAAATCACTGTGCTGAAAATGATGATGAGGAACATTATCGTATCGAAAAACTGGATGTCCCCCATTCCAGTCACAGTGA AATACAAACAAACGATGCTTATTCCGAAGATATGGACACGCCAGTTATTCAATTAATTAATCAAACGATATCAACCTCAA TACAAAAAAGAGCCTCAGATATTCATTTTGAGCCTGCTCAACGTGGCTATCGGATACGTATTCGGGTTGATGGAATCCTG CATGCTGTATCATCACCTTCTCCCCAAATGAATACCGGTATTCCAGCCCGTTTGAAGATCATGGCAAAACTCAATATTGC TGAAAAACGCCAGCCGCAGGATGGGCAATTTGCCTGGAATGATAGCAAAAACAGTTATGCGATACGTATATCAACATTGC CAACTCTACATGGAGAAAAGATTGTCCTGCGCGTTTTAAATACCATACACCAGCTATCGCTGGAGCAACTTGGCCTGCCA GAGCCTCAATTGCAACTTTTAAAACAGAAAATCCACTTACCGCAAGGTATGATCCTAGTGACAGGCCCGACAGGAAGCGG TAAAACTGTCACGCTGTATAGCTGTCTGCAATATTTAAATCAGGCGAAGAAAAATATCTGTAGCGTCGAAGATCCGGTAG AAATTCCCTTAAGTGGCATCAACCAGACACCAGTAAACAACAAAATTGGCCTCGATTTTGCCAAAGTCCTCAGAGCATTA TTACGGCAAGATCCCGATATCATTATGGTCGGTGAAATCCGTGACAATGAAACCGCCGAGATATCGATGAAGGCAGCGCA AACAGGTCATCTGGTTTTATCGACACTGCATACCAATTCGACAATTGATACGTTATCCCGCCTGCAAAATTTGGGGATTT CAGGCTATACCACAGCATCGTGCGTGAAATTGATTATTGCACAGCGGCTGGTGCGTACACTCTGCCCCCATTGCCGCCAG CAAGATAAAGAATGCACTGTCATCAATGTCGACAATGCCGCTATTCCTATAAAAAAAACCGATTCCGTAAAACAATCTAT TTCTATAAGACAATGGCTTGCGGTTGGCTGTGAACACTGTTTTTCTGGCTATTATGGCAGGACAGCCATCTACGAATTTC TTGAGCTCCAGCCAACCCTTCAGCAGACTCTGTCAGAACACTCGATTGATAACCTTCCCCAATTACTCGCTGCACAACAG CATTCAACTCTTTTTTCCGCAGGGCTGGTTTTGGTGGAAAAAGGCATAACAACACTGGAAGAGGTTTATCAGATTACAGG TCAGGAAACAGCATGA Protein sequence : MRNKENVLMEREINELCQRHQAIIIKREIHTMTIACSKSPNEDFIAALRFISGSIINVDIWPKAKIESMLTQGSSLVSCT ENHCAENDDEEHYRIEKLDVPHSSHSEIQTNDAYSEDMDTPVIQLINQTISTSIQKRASDIHFEPAQRGYRIRIRVDGIL HAVSSPSPQMNTGIPARLKIMAKLNIAEKRQPQDGQFAWNDSKNSYAIRISTLPTLHGEKIVLRVLNTIHQLSLEQLGLP EPQLQLLKQKIHLPQGMILVTGPTGSGKTVTLYSCLQYLNQAKKNICSVEDPVEIPLSGINQTPVNNKIGLDFAKVLRAL LRQDPDIIMVGEIRDNETAEISMKAAQTGHLVLSTLHTNSTIDTLSRLQNLGISGYTTASCVKLIIAQRLVRTLCPHCRQ QDKECTVINVDNAAIPIKKTDSVKQSISIRQWLAVGCEHCFSGYYGRTAIYEFLELQPTLQQTLSEHSIDNLPQLLAAQQ HSTLFSAGLVLVEKGITTLEEVYQITGQETA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-65 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-65 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_003469342.1 | integral membrane protein | VFG0233 | Protein | 1e-71 | 46 |
| hofB | YP_003469342.1 | integral membrane protein | VFG1880 | Protein | 2e-80 | 43 |
| hofB | YP_003469342.1 | integral membrane protein | VFG2426 | Protein | 1e-70 | 42 |
| hofB | YP_003469342.1 | integral membrane protein | VFG0182 | Protein | 1e-67 | 42 |
| hofB | YP_003469342.1 | integral membrane protein | VFG0112 | Protein | 4e-81 | 41 |
| hofB | YP_003469342.1 | integral membrane protein | VFG2048 | Protein | 2e-66 | 41 |
