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Name : lysS (XBJ1_3421) Accession : YP_003469303.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Virulence Product : lysine tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3325049 - 3326563 bp Length : 1515 bp Strand : - Note : - DNA sequence : ATGTCACAACAGCAGCAGGGAGCTGAACAGGCTCCTGATTTAAATAATGAACTGAAAACTCGCCGTGAAAAACTGGTTGC ACTGCGCGGCAACGGTATCGCATTCCCAAATGATTTTCGTCGTGAAAACATTTCTGAAGATCTGCATGCAAAATATGATG ACAAGACTCAGGAAGAACTGGAAGCGCTGAACATTGAAGTGACCGTAGCAGGCCGTATGATGACTCGTCGTATCATGGGC AAGGCATCCTTTGCGACCTTGCAGGACATGGGAGGACGTATTCAGGTTTACGTTTCCCGTGATGACCTGCCGGAAGGCAT TTATAATGAACAGTTCAAAAAATGGGATTTGGGTGACATTTTAGGCGCTCGCGGTAAATTGTTTAAAACCAAAACGGGTG AACTTTCCATTCACTGTACTGAACTGCGCTTGCTGACCAAAGCACTGCGTCCGCTGCCGGATAAATTCCACGGCTTGGCG GATCAGGAAATGCGCTACCGTCAGCGTTATTTGGATCTGATCTCGAATGACGAATCACGCAAGACATTCCAGATCCGTTC CCGCATCATGGCTGCATTGCGTAACTTCATGGTCAAAAAAGACTTCATGGAAGTTGAAACTCCAATGATGCAGGCGATCC CTGGCGGAGCGAGTGCGCGCCCATTTACTACGCACCACAACGCGCTGGACATCGATATGTACCTGCGCATTGCACCGGAA CTGTATCTGAAACGTCTGGTAGTGGGTGGTTTTGAGCGCGTTTTCGAAATCAACCGGAACTTCCGTAACGAAGGTATTTC TCCGCGTCATAACCCAGAGTTCACCATGATGGAACTCTACATGGCTTATGCGGATTACCAAGATCTGATCGTACTGACCG AAGAACTGTTCCGTACTCTGACTCAGGAAGTGCTGGGTACTACGTTGGTTAAATACGGTGAACAAGAATTCGATTTCGGT AAGCCTTTCACCAAAATGTCCATGAAAGAAGCGATCTGCAAATATCGCCCGGAAACCAATATCGCGGATCTGGATGATAT GGATAAAGCTGTCGCTATCGCGAAGTCTCTTGGTATTGATATTGAAAAAAGTTGGGGCTTGGGTCGTATTCAGTGTGAAA TATTTGAAGAAACTGCTGAAAGCCACCTGATTCAACCGACTTTCATTACTGAATACCCAGCAGAAGTTTCTCCGCTGGCA CGCCGTAATGATGATAACCCATTCATTACAGACCGTTTTGAATTCTTTATCGGTGGCCGTGAAATTGGTAACGGCTTCTC CGAACTGAACGATGCAGAAGATCAGGCAGAACGTTTTGCAGAGCAAGTTCGTCATAAAGATGAAGGTGACGACGAAGCGA TGTTCTATGATGATGACTACGTTACTGCACTGGAACACGGTTTACCACCAACAGCAGGTTTGGGGATTGGTATCGACCGT ATGGTTATGCTGTTCACGGATAGCCATACCATCCGTGACGTGATCCTGTTCCCAGCAATGCGCCCGAATAAATAA Protein sequence : MSQQQQGAEQAPDLNNELKTRREKLVALRGNGIAFPNDFRRENISEDLHAKYDDKTQEELEALNIEVTVAGRMMTRRIMG KASFATLQDMGGRIQVYVSRDDLPEGIYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLA DQEMRYRQRYLDLISNDESRKTFQIRSRIMAALRNFMVKKDFMEVETPMMQAIPGGASARPFTTHHNALDIDMYLRIAPE LYLKRLVVGGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTLTQEVLGTTLVKYGEQEFDFG KPFTKMSMKEAICKYRPETNIADLDDMDKAVAIAKSLGIDIEKSWGLGRIQCEIFEETAESHLIQPTFITEYPAEVSPLA RRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRHKDEGDDEAMFYDDDYVTALEHGLPPTAGLGIGIDR MVMLFTDSHTIRDVILFPAMRPNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-173 | 68 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-92 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003469303.1 | lysine tRNA synthetase | VFG1668 | Protein | 5e-173 | 68 |
