Gene Information

Name : alpA (XBJ1_3366)
Accession : YP_003469248.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3282578 - 3282784 bp
Length : 207 bp
Strand : -
Note : -

DNA sequence :
ATGGCAGTGACAGCATTGAAGGTAAATCTTATCCGTTTGCCGGAAGTTCAGCGCCGAACGGGTTACAGCAAGGCGTGGAT
CTACAAATTAATTAGCGATGGAGAATTCCCGAAGCAGGTCAAAATCGGCCCCCGCTCCATCGCATTTATTGAATCAGAAA
TAGATAACTGGATTGCCCAACGCATCGCGGAATCACGGGCGGCATAA

Protein sequence :
MAVTALKVNLIRLPEVQRRTGYSKAWIYKLISDGEFPKQVKIGPRSIAFIESEIDNWIAQRIAESRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 7e-08 48
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-07 48
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 44
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 44
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-06 43
unnamed CAA21398.1 - Not tested HPI Protein 1e-08 43
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 9e-09 43
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 1e-04 43
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 1e-04 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alpA YP_003469248.1 CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage VFG1480 Protein 3e-08 48
alpA YP_003469248.1 CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage VFG1141 Protein 3e-10 44