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Name : clpB (XBJ1_3257) Accession : YP_003469139.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Virulence Product : ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3186216 - 3188798 bp Length : 2583 bp Strand : - Note : - DNA sequence : ATGCGTCTGGATCGTCTTACTAATAAATTCCAGCTTGCTCTCGCTGACGCGCAATCTCTTGCATTAGGGCGTGATAATCA ATTCATCGAACCGATCCACTTGATGAGCGCATTGCTTCATCAAGAGGGGGGCTCTGTTCGTCCCTTACTAACATTGGCAG GGGTTGATACGAGTAGCATCAACAATCAACTTAACCAAGCCTTAGGTCGATTACCGAAAGTAGAGGGTAATGGTGGTGAT GTACAGGTATCCAATGAGCTGGGGCGTTATTTAAACTTGTGTGACAAACTTGCGCAAAAAGCAGGTGACAATTTTATTTC TTCTGAACTCTTTGTTCTGGCGGCAATAGAAGAACGTGGAACATTAAGTGACATACTTAAAGCTGTGGGAACAACCAAAG ATAAAATCGCTAAGGCAATAGAACAGATGCGTGGTGGTGAGAAAGTGAGTGATCAAGGTGCTGAAGATCAGCGTCAGGCA CTAAAAAAATACACAATCGATCTAACTGAACGTGCCGAACAGGGCAAATTAGATCCCGTGATTGGGCGCGATGAAGAAAT TCGCCGGACAATTCAGGTATTACAGCGTAGAACTAAAAATAACCCTGTTCTTATTGGTGAACCGGGTGTTGGGAAAACCG CCATAGTTGAAGGTCTGGCGCAGCGTATTATTAATGCTGAAGTTCCAGAGGGGCTGAAAAACAAACGCGTTCTGTCCCTT GATATGGGAGCGCTAGTGGCGGGTGCGAAATACCGTGGTGAATTTGAAGAACGTTTGAAAGGTGTTTTGAACGATCTCGC CAAACAGGAAGGCTCAGTCATTCTGTTCATTGATGAATTGCATACGGTGGTAGGAGCAGGTAAGGCTGATGGCGCAATGG ATGCCGGTAACATGCTTAAACCCGCCTTGGCTCGGGGTGAACTACACTGTGTTGGTGCGACGACACTGGATGAATATCGT CAGTACATTGAAAAAGATGCTGCTTTGGAACGTCGTTTCCAGAAAGTGTATGTGGCGGAGCCAACTGTTGAAGATACCAT TGCTATCCTGCGTGGGCTTAAAGAACGCTATGAATTGCATCACCATGTACAAATTACTGATCCAGCAATTGTTGCTGCTG CGACTTTGTCTCATCGCTATATTTCAGATCGTATGTTGCCAGACAAAGCCATCGATCTAATTGATGAAGCAGGAGCAAGT TTGCGTATGCAAATGGATTCTAAACCAGAAGCACTGGATCGTTTGGAGCGTCGGGTTATTCAGTTAAAGCTTGAACAGCA GGCACTGAAAAAAGAATCGGACGATGGCAGTAAAAAACGACTCGAAATGTTGAATATGGAGCTGGTGGAGAAAGAACGCG AATATTCTGAGCTGGAAGAAGAGTGGAAAGCCGAAAAAGCAGAGCTGACTGGCACTCAGAACATTAAAGCAGAATTAGAG AATACGCGCCTTGAATTAGAAAAAGCCCGTCGTAGTGGTGATCTAGCGAAGATGTCTGAAATCCAGTACGGAAAAATTCC AGAATTGGAAAAACGTTTGGCAACGGCAGCAACGGCAGCAACGGCAGAAAGCCATCATATGAAACTGCTGCGTAACAAAG TAACTGATGCCGAAATTGCCGAAATTCTTGCTCGCTGGACGGGGATTCCTGTATCCAGAATGTTGGAGAGTGAAAAAGAT AAACTTCTGAGCATGGAGCATGAATTACATAAACGTGTCATCGGGCAAAATGAGGCTGTTGAGGCTGTATCTAATGCAAT TCGTCGTAGCCGTGCGGGATTATCCGATCCAAATCGTCCGATTGGTTCTTTTATGTTTTTGGGGCCGACGGGGGTAGGTA AAACCGAATTGTGCAAAGCGTTGGCCAATTTCCTATTCGACAGTGATGATGCGATGGTGCGCCTAGACATGTCGGAATTT ATGGAAAAACATACTGTTTCAAGACTGGTGGGGGCTCCTCCTGGATATGTTGGATATGAAGAGGGGGGGTATCTGACAGA AGCGGTGCGTCGTCGCCCTTATTCAGTGATTTTACTGGATGAGATAGAAAAAGCTCATCCTGATGTCTTCAACATTCTGT TACAGGTATTGGATGATGGTCGTCTGACGGATGGACAGGGAAGAACGGTTGATTTTCGCAATACTGTTATAATTATGACC TCTAATCTAGGTTCAGATATAATTCAGGAACGTTTTGGTGCACTGGATTATACGGGAATGAAAGATATGGTGATGGAAGT AGTTGGTCATCATTTCAGACCTGAATTTATTAACCGTGTGGATGAAGTCGTCGTGTTCCATCCATTAGGAAAAGAACATC TGACATCCATTGCGAATATCCAATTACAACGTTTATACCATCGGTTGGAAGAGCGTGGCTATCAGGTTACGATGACATCG ACAGCATTAGAGAAACTGAGTGATGCTGGTTTTGATCCTGTATATGGTGCTCGGCCATTAAAACGAGCCATCCAGCAAGA GATCGAAAACCCTTTGGCTCAGAAGATCCTTTCAGGCAAACTAATTCCCGGAAAATTGGTTACTTTAGATCTGGAAAACG ACCACATAATTGCAAAACAATGA Protein sequence : MRLDRLTNKFQLALADAQSLALGRDNQFIEPIHLMSALLHQEGGSVRPLLTLAGVDTSSINNQLNQALGRLPKVEGNGGD VQVSNELGRYLNLCDKLAQKAGDNFISSELFVLAAIEERGTLSDILKAVGTTKDKIAKAIEQMRGGEKVSDQGAEDQRQA LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINAEVPEGLKNKRVLSL DMGALVAGAKYRGEFEERLKGVLNDLAKQEGSVILFIDELHTVVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGAS LRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDGSKKRLEMLNMELVEKEREYSELEEEWKAEKAELTGTQNIKAELE NTRLELEKARRSGDLAKMSEIQYGKIPELEKRLATAATAATAESHHMKLLRNKVTDAEIAEILARWTGIPVSRMLESEKD KLLSMEHELHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFLFDSDDAMVRLDMSEF MEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMT SNLGSDIIQERFGALDYTGMKDMVMEVVGHHFRPEFINRVDEVVVFHPLGKEHLTSIANIQLQRLYHRLEERGYQVTMTS TALEKLSDAGFDPVYGARPLKRAIQQEIENPLAQKILSGKLIPGKLVTLDLENDHIIAKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-159 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003469139.1 | ATP-dependent protease | VFG2084 | Protein | 3e-98 | 41 |
