Gene Information

Name : XBJ1_0300 (XBJ1_0300)
Accession : YP_003466247.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : insertion element IS1 1/5/6 protein insB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 307576 - 307998 bp
Length : 423 bp
Strand : +
Note : -

DNA sequence :
GTGACGACGCTTCCTCTTGACGGGGATGACATTCATCTTATCTGTGAAGTGGATGAGCAGGAGTCGTTTGTGGGGAGTCA
GAAAAATCAGCGCTGGCTCTGGTATGCCTGGGAGCCGCGTATGAAACGGATAGTGGCACATACTTTTGGGGATCACAGCA
GAAAAACATGGGAAAAACTACTGGCACTCTTGTCACCCTTTAATATCCGGTTTTACTGTACGGATGATTATGCCGTTTAT
GATTGTCTTCCTGAAGAAGTCCATCTTACTGGAAAGATATTTACCCAACGTATAGAGAGAACCAACCTTACCCATCGTAC
CCGAATAAAAAGGCTGAATAGAAAAACAATCGGTTATTCCAAATCTGAAGAAATGCACGATAAAGTGATAGGCACTTTCA
TTGAGCGTGAAAACTATATTTAG

Protein sequence :
MTTLPLDGDDIHLICEVDEQESFVGSQKNQRWLWYAWEPRMKRIVAHTFGDHSRKTWEKLLALLSPFNIRFYCTDDYAVY
DCLPEEVHLTGKIFTQRIERTNLTHRTRIKRLNRKTIGYSKSEEMHDKVIGTFIERENYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1123 NP_286658.1 hypothetical protein Not tested TAI Protein 3e-17 45
Z1562 NP_287066.1 hypothetical protein Not tested TAI Protein 3e-17 45
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-22 44
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 2e-21 43
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-22 43
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-22 43
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-22 43
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 9e-22 43
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 1e-21 43
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 5e-22 43
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 5e-22 43
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 3e-22 43
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 5e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_0300 YP_003466247.1 insertion element IS1 1/5/6 protein insB VFG0612 Protein 1e-20 41