Gene Information

Name : soxS (XBJ1_2745)
Accession : YP_003468633.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2724655 - 2725041 bp
Length : 387 bp
Strand : +
Note : -

DNA sequence :

ATGCCACAAGATAACCACTTAGCACTTGTATGCGCACTGAGTAAATGGATCGAAAACCACCTTGGACGAGTTATCCATCT
TGAAGAGCTTGCTGCTTATTCTGGCTATTCGCTTTGGCACATGCAGAAAATATTCAAGGAAGTCACGGAAATTTCGCTTG
GGAAGTACATACGCCAACGGCGGTTGGCCGGCGCTGTTCACCTGCTGAGAAACAGCTCCTTGTCTATTTTTGATATTGCC
TTAGATTTCGGCTTCGGCTCTCAATCTCATTTCACCTATATGTTCCGTAAAGAATATGGCATTACACCTTACGATTTTCG
TCAAAGTACAGATATAGAACTTGAGGTTAAGCTTCCATTGCATTTGACTTATAATTGCCAGTTATGA

Protein sequence :

MPQDNHLALVCALSKWIENHLGRVIHLEELAAYSGYSLWHMQKIFKEVTEISLGKYIRQRRLAGAVHLLRNSSLSIFDIA
LDFGFGSQSHFTYMFRKEYGITPYDFRQSTDIELEVKLPLHLTYNCQL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
soxS	YP_219131.1	DNA-binding transcriptional regulator SoxS	Not tested	SPI-4	Protein	5e-19	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
soxS	YP_003468633.1	AraC family transcriptional regulator	CP001138.1.gene4488.	Protein	1e-19	42
soxS	YP_003468633.1	AraC family transcriptional regulator	CP001918.1.gene327.p	Protein	7e-20	42
soxS	YP_003468633.1	AraC family transcriptional regulator	CP000647.1.gene4499.	Protein	1e-19	42
soxS	YP_003468633.1	AraC family transcriptional regulator	NC_002695.1.914293.p	Protein	4e-19	41
soxS	YP_003468633.1	AraC family transcriptional regulator	CP000034.1.gene4505.	Protein	8e-19	41
soxS	YP_003468633.1	AraC family transcriptional regulator	BAC0371	Protein	4e-19	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
soxS	YP_003468633.1	AraC family transcriptional regulator	VFG0585	Protein	1e-19	42