Gene Information

Name : fliP (XBJ1_2715)
Accession : YP_003468603.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2689645 - 2690454 bp
Length : 810 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAATAGCGTTTTCTTTATGACCGGCACTCCAATGACTGGCAAGAAATTTGTTTCTCTCCTCCGGCCTGTGCATTT
AGCAACCCTGCTGATGGCGCTTTTGTTGCCGCTATTCCCCATGAATGCCGCGGCCGCATTGCCTGGCATCATCAGCCAGC
CGATGGCAAATGGTGGACAAAGCTGGTCACTGCCGGTGCAAACTCTGGTTTTCATCACGGCACTGGGTTTTATTCCAGCC
GCTTTGCTGATGATGACCAGCTTTACCCGCATCATTATCGTGCTTGGTTTACTGCGTAACGCACTGGGGACACCTTCTGC
CCCACCCAATCAAATCATGATTGGCTTGGCGCTGTTCATGACTTTTTTCATTATGTCACCCGTATTCGATAAGGTTTATC
AAGATGCTTACCTGCCTTTCAGTGAGGACAAAATAAGTCTGGAAGCTGCACTGGATAAAGGTGCCCAGCCTCTGCGTCAG
TTCATGTTGCGCCAGACACGCCAAACCGATCTGGCACTGTTTGCCCGTCTTGCGGATCAGGATGCTTTTGAAACAGCGGA
TTCCGTCCCCATCCGGGTTCTGGTTCCGGCATTTATTACCAGTGAATTGAAAACCGCCTTCCAGATTGGTTTTACGCTCT
TCATTCCTTTCCTGATCATCGATCTGGTCGTTGCCAGTGTTTTGATGGCCTTGGGGATGATGATGGTTCCACCTGCCACC
ATATCGCTGCCCTTCAAACTCATGTTGTTTGTCTTGGTGGATGGCTGGCAATTGCTGCTTGGCTCATTGGCACAAAGCTT
TTATGTCTAG

Protein sequence : 
MKNSVFFMTGTPMTGKKFVSLLRPVHLATLLMALLLPLFPMNAAAALPGIISQPMANGGQSWSLPVQTLVFITALGFIPA
ALLMMTSFTRIIIVLGLLRNALGTPSAPPNQIMIGLALFMTFFIMSPVFDKVYQDAYLPFSEDKISLEAALDKGAQPLRQ
FMLRQTRQTDLALFARLADQDAFETADSVPIRVLVPAFITSELKTAFQIGFTLFIPFLIIDLVVASVLMALGMMMVPPAT
ISLPFKLMLFVLVDGWQLLLGSLAQSFYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-27 44
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-27 44
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-27 44
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 9e-29 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 3e-34 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 3e-34 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-34 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 4e-35 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 4e-35 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-30 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 4e-34 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003468603.1 flagellar biosynthesis protein VFG2338 Protein 1e-90 86
fliP YP_003468603.1 flagellar biosynthesis protein VFG2494 Protein 6e-71 66
fliP YP_003468603.1 flagellar biosynthesis protein VFG2016 Protein 1e-61 60
fliP YP_003468603.1 flagellar biosynthesis protein VFG1259 Protein 7e-62 58
fliP YP_003468603.1 flagellar biosynthesis protein VFG0188 Protein 1e-31 43
fliP YP_003468603.1 flagellar biosynthesis protein VFG0044 Protein 2e-33 42
fliP YP_003468603.1 flagellar biosynthesis protein VFG0394 Protein 2e-30 41