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Name : clpB (XBJ1_0272) Accession : YP_003466221.1 Strain : Xenorhabdus bovienii SS-2004 Genome accession: NC_013892 Putative virulence/resistance : Virulence Product : ClpA/B-type chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 279323 - 282037 bp Length : 2715 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor DNA sequence : ATGATTCAGATTGATCTGCCCACTCTTGTAAACCGTTTAAACCCGATGACCCGCCATGCACTGGAAGCGGCGGCGGCATC CTGTGTCAGCCAACAGCAGCCTGAAATTACTGTTGCACAACTGTTGTTTCAGATGATCGACACACCACTCAGTGATGTGC GCCTGATCCTCAATAAGGCAGACATCGATAAAGATCTGCTGAAAGAACAACTCGATCAGATGATGCCTCATCATCAGGCG ATTGTACAAACCTACCCGAACTTCTCACCGATGCTGGTGGAATGGTTACAGGATAGCTGGCTGCTGGCTTCTACGGAGAT GCAGCATACTGAATTACGCGGTGGCGTCATGCTGATTGCTCTGCTGTTCAGTCCAATGCGTTATCTGACTCCACAGCCCG CGCGCATGCTGGCGGGTATCAACCGTGAATTGCTGCGTCAGAACTTTACTGAATGGACGAATGGCTCTGCCGAACAGCCT TTCAGCGGCGACGATAAAAATGGGCAGGGCGTCCATCCGGCAAACAGCGACAGCCTGCTGGCGCGTTTTACCCAGAATAT GACTGAACAGGCGCGTCAGGGCAAACTTGATCCTGTGCTGTGCCGTGATAACGAAATCGATCTGATGATCGACATTCTCT GCCGTCGCCGCAAAAACAACCCGATCGTCGTGGGTGAAGCGGGGGTGGGTAAAAGTGCCCTGATTGAAGGTCTGGCGCTG CGCATCATCAATGACCGCGTACCGGATAAATTGCGCCACAGTGAACTGATGACACTGGATCTGGGGGCATTGCAGGCAGG GGCTGCGGTTAAAGGTGAGTTTGAAAAACGCTTCAAAGGCATCATGGCTGAAATTAGTCAATCATCTAAGCCGATCATCC TGTTTATCGATGAAGCGCACACCCTGATTGGTGCCGGTAACCAGGCTGGCGGACTGGATATTTCCAATCTGCTGAAACCT GCATTGGCACGTGGTGAACTGAAAACCATCGCAGCGACTACATGGAGCGAGTACAAAAAATACTTCGAAAAGGACGCAGC ACTGTCTCGTCGCTTCCAATTAGTGAAAGTCTCTGAGCCAAGCGCGGAAGAAGCCACTGTGATCATGCGTGGTTTGCGCG CCATTTACGAACAGGCGCATGGTGTTCTGATCGATGATGAAGCACTGAAAGCCTCTGCGGTACTGAGTGACCGTTATCTC TCTGGCCGCCAACTGCCGGACAAAGCGATTGACGTACTGGATACCGCCTGTGCCCGTGTCGCCATTAACCTGACATCGCC ACCACGTCAGATCTCCTCACTGACGACTGAATTGCACCAGATGCAAATGGAAATCGATGTTCTGAAAAGAGAACAGCGGA TGGGGCTGAATGAACATGCGGACAGACTGGAAGAACTGCAAAACCAGCAGGTAGAGATCCAAGAAGAACTCGTCACGCTG GAAAAAAACTGGCGGCAACAGCAAGAGTTGGTGACACAGATCATCGAATTGCGCGGCCAACTCCTGGCGGATAGCGACGA GTCAGTTGCAGCAGAAACGACGGATAAAACCATCGAAAATGCGGTTGAAGAGACGGCTCAAGACGCGAAAGAGCAGGAAG CTATTGCGCAAGACGAGCCAGAAGCCGCCGCTGATGAGCAATCCCTGATCGAAAAACTGGCTCTGCTCAACGCACAACTG ACAGAGTTACAGCAGAAGCAAACGCTGGTTTCTCCCCATGTAGACAAAACGCAGATTGCCTCGGTTATCGCTGAGTGGAC GGGCGTTCCATTGAACCGCCTGTCACAGAGCGAACTGTCTATCGTGACCGAACTGCCTACCCATCTGGGACAAAGCATCA AAGGGCAGGATGTTGCGATCCAGAACCTGCATAAACACCTGCTGACCGCTCGTGCAGATTTGCGTCGTCCGGGACGTCCT CTGGGCGCATTCCTGCTGGTGGGGCCAAGTGGTGTTGGTAAAACCGAAACCGTGCTGCAAATTGCTGAACTGATGTTTGG GGGGCGCCAATACCTCACCACCATCAACATGTCTGAGTTTCAGGAGAAACATACCGTTTCCCGCCTGATTGGCTCTCCCC CGGGCTACGTAGGTTATGGGGAAGGTGGTGTACTGACCGAAGCCATTCGCCAGAAACCGTACTCCGTTGTGCTGCTGGAT GAAGTCGAAAAAGCGCATCCTGATGTACTGAACCTGTTCTATCAGGCCTTCGACAAAGGCGAACTGGCCGATGGCGAAGG GCGTATCATCGACTGTAAAAATGTCGTGTTCTTCCTGACTTCTAACCTTGGTTATCAAACTATCGTTGATCATGCCGAGC AGCCAGATCAACTTAACGACCTGCTCTACCCTGAACTGGCCGCGTTTTTCAAACCCGCATTGCTGGCGCGTATGGAAGTG ATCCCTTACCTGCCTTTGGGTCACGAAACGCTGAAAACCATCATTCAGAGCAAGCTGGCTCGACTGGATAGCCTGCTGTC TCAGCGCTTTAACGCCGAAGTCACGATCAGCGATGACGTATCGGAAGAGATCCTGCAACGTGCCACCCGTGCGGAAAACG GCGCCCGTATGCTGGAATCCATCATTGATGGTGCACTATTACCGCCTGTTTCATTACTGCTGTTGCAGAAAATGGCCGCA GGCACCGCAATCAGTGCCATTCGCTTAACCGTAGCAGAACATGAGTTCCATGCTGAGGTTGAGGAGGCAGAATAA Protein sequence : MIQIDLPTLVNRLNPMTRHALEAAAASCVSQQQPEITVAQLLFQMIDTPLSDVRLILNKADIDKDLLKEQLDQMMPHHQA IVQTYPNFSPMLVEWLQDSWLLASTEMQHTELRGGVMLIALLFSPMRYLTPQPARMLAGINRELLRQNFTEWTNGSAEQP FSGDDKNGQGVHPANSDSLLARFTQNMTEQARQGKLDPVLCRDNEIDLMIDILCRRRKNNPIVVGEAGVGKSALIEGLAL RIINDRVPDKLRHSELMTLDLGALQAGAAVKGEFEKRFKGIMAEISQSSKPIILFIDEAHTLIGAGNQAGGLDISNLLKP ALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPSAEEATVIMRGLRAIYEQAHGVLIDDEALKASAVLSDRYL SGRQLPDKAIDVLDTACARVAINLTSPPRQISSLTTELHQMQMEIDVLKREQRMGLNEHADRLEELQNQQVEIQEELVTL EKNWRQQQELVTQIIELRGQLLADSDESVAAETTDKTIENAVEETAQDAKEQEAIAQDEPEAAADEQSLIEKLALLNAQL TELQQKQTLVSPHVDKTQIASVIAEWTGVPLNRLSQSELSIVTELPTHLGQSIKGQDVAIQNLHKHLLTARADLRRPGRP LGAFLLVGPSGVGKTETVLQIAELMFGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLD EVEKAHPDVLNLFYQAFDKGELADGEGRIIDCKNVVFFLTSNLGYQTIVDHAEQPDQLNDLLYPELAAFFKPALLARMEV IPYLPLGHETLKTIIQSKLARLDSLLSQRFNAEVTISDDVSEEILQRATRAENGARMLESIIDGALLPPVSLLLLQKMAA GTAISAIRLTVAEHEFHAEVEEAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 69 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 69 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-133 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003466221.1 | ClpA/B-type chaperone | VFG2084 | Protein | 0.0 | 59 |
| clpB | YP_003466221.1 | ClpA/B-type chaperone | VFG2076 | Protein | 3e-146 | 41 |
