Gene Information

Name : pykF (XBJ1_2503)
Accession : YP_003468393.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : pyruvate kinase I (formerly F), fructose-stimulated
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2475864 - 2477273 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAACCAAAATTGTTTGTACTATCGGGCCAAAAACAGAATCCGAAACAAAACTGACCGAATTGCTTAATGCAGG
CATGAATGTCATGCGCCTAAATTTTTCTCACGGTGACTACGAAGAACATGGCCAACGTATTAAAAACCTTCGTGCAGTCA
CTGCGAAAACAGGCAAAAAAGCAGCTATCCTACTGGATACCAAAGGCCCTGAAATTCGTACCATAAAGCTGGAAGGTGGT
AATGATGTCTCTCTCACTGCGGGTCAGACTTTCACTTTTACAACTGATAAATCGGTTGTTGGTAATCAAGAATGTGTCGC
CGTCACTTATGCTGGTCTGCCAGCAGACCTGAAACCGGGTAATACCATTTTGGTTGATGATGGTTTGATCGCCATGACAG
TAAAAAACATCACCGAGACTGAAGTCATCTGTGAGGTATTGAACAACGGTGATTTAGGCGAAAACAAAGGCGTCAATCTG
CCAAATGTCGCCATCAACTTGCCTGCACTGGCAGAAAAAGATAAACAGGATCTTATTTTCGGTTGCGAGCAAGGTGTTGA
TTTCGTCGCAGCATCTTTCATCCGTAAGCGTTCTGATGTACTGGAAATCCGTGATCACCTGAAAGCTCACGGTGGAGAGC
ACATCCAAATCATCTCCAAAATTGAAAATCAGGAAGGCCTGAATAATTTTGATGAAATTATGGAAGCTTCAGACGGTATC
ATGGTTGCCCGTGGTGATTTGGGTGTTGAGATCCCAGTAGAAGAAGTTATCTTCGCTCAGAAGATGATGATCGAAAAATG
TAATGCAGCACGCAAAGTTGTCATCACTGCAACCCAAATGCTGGATTCCATGATCAAAAATCCACGCCCTACCCGCGCTG
AAGCAGGTGACGTTGCCAATGCTATCTTGGATGGCACTGATGCCGTGATGCTTTCCGGTGAAAGTGCAAAAGGGAAATAC
CCTATCGAAGCGGTTTCTATCATGGCAACCATCTGTGAACGTACAGATCGCATCATGAACAGCAGAATTGAAAATATCAA
AACCCAGAAGCTGCGCGTTACTGAAGCAATCTGCCGTGGTGCAGTTGAAATTGCAGAAAAACTGGAAGCCCCCCTGATTG
TCGTTGCAACCTATGGTGGAAAATCTGCAAGATCTATCCGTAAATATTTCCCTAACGCGCCTATTCTCGCTCTGACTACC
AATGAAATCACTGCCCGACAATTGCTGTTGGTCAAAGGTGTTTCCACACAAATTGTCAAAGAAATCGCCTCTACCGATGA
TTTCTATCGGATTGGTAAAGAAGCAGCACTGGCAAGTGGTATCGCCAATAAAGGTGATGCCGTTGTAATGATATCTGGTG
CGTTAGTACCAAGTGGTACAACAAATACTTCTTCAGTCCACGTTCTATAA

Protein sequence : 
MKKTKIVCTIGPKTESETKLTELLNAGMNVMRLNFSHGDYEEHGQRIKNLRAVTAKTGKKAAILLDTKGPEIRTIKLEGG
NDVSLTAGQTFTFTTDKSVVGNQECVAVTYAGLPADLKPGNTILVDDGLIAMTVKNITETEVICEVLNNGDLGENKGVNL
PNVAINLPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVLEIRDHLKAHGGEHIQIISKIENQEGLNNFDEIMEASDGI
MVARGDLGVEIPVEEVIFAQKMMIEKCNAARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY
PIEAVSIMATICERTDRIMNSRIENIKTQKLRVTEAICRGAVEIAEKLEAPLIVVATYGGKSARSIRKYFPNAPILALTT
NEITARQLLLVKGVSTQIVKEIASTDDFYRIGKEAALASGIANKGDAVVMISGALVPSGTTNTSSVHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 85
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 85
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 85
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_003468393.1 pyruvate kinase I (formerly F), fructose-stimulated VFG0479 Protein 0.0 85