Gene Information

Name : tpx (XBJ1_2467)
Accession : YP_003468357.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 2442069 - 2442572 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGACACAAACAGTCAAGTTTCAAGGTAGCGATATCACCATTAATGGAGATTTTCCACAGGTAGGCCAAACAACAAAAGA
ATTCTCACTGGTAGCTAAAGATCTCGCCGATGTGACACTGAGCCAGTACGCAGGAAAAAGAAAAGTACTCAATATTTTCC
CAAGTATTGATACCGGTGTTTGTGCCACATCCGTCCGTAAATTCAATCAAGTTGCCAGCGAACTGAATAATACTGTCGTG
CTTTGCATTTCAGCAGACTTACCTTTTGCACAATCCCGTTTCTGTGGTGCTGAAGGTTTGTCAAATGTGGTGATGCTTTC
TACATTACGTGGTGGTAAATTTCACGAAGATTACGGTGTTGCGATAAGCCAAGGCCCATTAGTTGGGTTAACTGCACGTG
CCGTTGTTGTCTTGGATGAAAATAATCAGGTTATTTATAGCCAGCTAGTTGATGAAATCACCAATGAACCTGACTATGAC
AGCGCATTATCAATACTAAAATAA

Protein sequence : 
MTQTVKFQGSDITINGDFPQVGQTTKEFSLVAKDLADVTLSQYAGKRKVLNIFPSIDTGVCATSVRKFNQVASELNNTVV
LCISADLPFAQSRFCGAEGLSNVVMLSTLRGGKFHEDYGVAISQGPLVGLTARAVVVLDENNQVIYSQLVDEITNEPDYD
SALSILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-34 48
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-34 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-34 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-34 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003468357.1 thiol peroxidase VFG0087 Protein 6e-35 48