Gene Information

Name : XBJ1_2402 (XBJ1_2402)
Accession : YP_003468296.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : periplasmic chelated iron-binding protein yfeA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2374412 - 2375326 bp
Length : 915 bp
Strand : +
Note : -

DNA sequence :
ATGAACAAAAGACGTTCAATTTCTGCTTTCCCGATATTCAGTATGATTATCGCATTATTCACGCTCACCCTATTCAGCCA
GCAAGCCTATGCAGATAAAAAATTCAGGGTTGTAACTACCTTTACCATTATTCAGGATATGGCTCAAAATATCGCAGGTG
ATACAGCCATCGTTGAATCCATCACAAAACCAGGCGCAGAGATCCACGATTACCAGCCTACGCCAAAAGACATCATTAAA
GCACAGCGTGCAGATCTTATCCTCTGGAATGGCTTGAATCTTGAACGCTGGTTTGAACGTTTTTTTGAAAACATGAAAGA
CATCCCTACGGCCGTCATTACTGAGGGTATAACCCCGCTGCCGATTCGTGAGGGACCTTACAATAAAAATCCTAATCCCC
ATGCTTGGATGTCTCCCAAAAACGCCCTGATTTATATTGAAAATATCCGTAAGTCTTTCGTTAAATATGATCCTGCGAAT
GCAGAGGTTTATAATCGCAATGCAAAAATTTACGCAGAAAAAATGGTCAAACTAGATGCACCACTCAGGGAACGCCTGTC
CCGTATTCCAGAAAATCAACGCTGGCTGGTAACCAGTGAAGGGGCTTTCAGCTATCTCACACAAGATTATGGTTTCAAGG
AAGTGTATTTATGGCCAATCAATGCTGAAGAACAAGGTTCTCCGCAACAGGTTCGCCGTGTTATTGATACCATAAGGACA
CAGAAAATCCCTGTCGTCTTCAGTGAAAGTACCGTTTCAGATAAACCAGCAAAACAAGTCAGCAAAGAAACCGGGGCTCA
CTACGGTGGAATACTCTATGTCGATTCTCTTTCTACCCCAAAAGGTCCAGTGCCTACTTATATTGACCTGCTGAACACCA
CTGTGGACACCATCGCGAAAGGATTTAATCAATGA

Protein sequence :
MNKRRSISAFPIFSMIIALFTLTLFSQQAYADKKFRVVTTFTIIQDMAQNIAGDTAIVESITKPGAEIHDYQPTPKDIIK
AQRADLILWNGLNLERWFERFFENMKDIPTAVITEGITPLPIREGPYNKNPNPHAWMSPKNALIYIENIRKSFVKYDPAN
AEVYNRNAKIYAEKMVKLDAPLRERLSRIPENQRWLVTSEGAFSYLTQDYGFKEVYLWPINAEEQGSPQQVRRVIDTIRT
QKIPVVFSESTVSDKPAKQVSKETGAHYGGILYVDSLSTPKGPVPTYIDLLNTTVDTIAKGFNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-94 62
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-94 62
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-94 62
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-94 62
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-94 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_2402 YP_003468296.1 periplasmic chelated iron-binding protein yfeA BAC0439 Protein 5e-110 76
XBJ1_2402 YP_003468296.1 periplasmic chelated iron-binding protein yfeA BAC0349 Protein 2e-94 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_2402 YP_003468296.1 periplasmic chelated iron-binding protein yfeA VFG0525 Protein 2e-94 62