Gene Information

Name : XBJ1_2096 (XBJ1_2096)
Accession : YP_003467995.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : ClpA/B-type chaperone
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2053604 - 2056237 bp
Length : 2634 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor

DNA sequence :
ATGCCAGAAATCAGCCGTTCTGTACTCTTTGGTAAACTCAATCGTGTACTCTTCACCTCACTGGAAAATGCGACAACTTT
CTGCAAACTACGCAGTAATCCTTATGTCGAGTTAGTCCATTGGCTGCACCAGCTTATGCAGCAACAAGACTGTGATTTAC
AATCGGTTATCCGTTACTTTGCATTAGATGAAGCCAAGCTGGCAAAAGATATTATTACAGCACTGGATCGCCTGCCACGT
GGAGCCAGTGCGATTTCTGATCTTTCCGAACATATTGATAGTGCCGTAGAGCGTGCCTGGGTATATGGATCATTAAAATT
TGGTGTTGACAAGATCCGTACCGCGCACTGGCTGATTGGTATGTTAAAGACTTTCAATCTGTACAATACCCTGAAAGCCA
TTTCCCGACAGTTTGAACAAGTCAATGCAGATACGTTAATAGATAATTTCAACGCCATCTGCGGTAATAGCAGTGAAGAA
CCGGAGAATGAACCACCCTCTCATCATTCCCAACCGACAAAACCACAATCCTCTGACAGTGCCCTGCGGCAATATGGGCA
AAATCTCACTGATCTGGCTCGCCATGGTGATATTGATCCCGTATCAGGACGCGATGAAGAAATACGCCAGATTGTCGATA
TCTTGATGCGCCGCCGCCAAAATAACCCCTTACTGACCGGTGAAGCTGGGGTAGGAAAAACCGCCATCATTGAAGGGCTG
GCATTGCGGATCGCCGCAAATGAGGTACCTCCACCACTGCAAAATGTGCAACTTTGGTTATTGGATATTGGGATGTTACA
AGCCGGGGCGGGAATCAAGGGCGAATTCGAATCCCGCTTGCGCAGAGTGATTGACGAAGTGCAATCCAGCCCCCTTCCGA
TCATTTTATTCATTGATGAAATCCATACATTAATCGGTGCAGGCGGGCAACAGGGAACGGGGGATGCGGCCAATTTACTT
AAGCCCGTACTGGCACGTGGTCAGTTACGAACGCTTGGAGCAACCACCTGGTCTGAATACAAGAAATATATTGAAAAAGA
TCCGGCCCTCACCCGGCGTTTTCAGGTCGTCCAAATTCATGAACCCGATGAAGCCAAGGCACTTTTGATGCTACGCAGTC
TGGTCTGGACGCTGGAAAAACATCACCGTGTTCTCCTACTGGATGAGGCCGTTGAAGCTGCCATACGGCTTTCCCATCGC
TATATTCCCGCTCGTCAGCTACCCGATAAGGCTGTAGCTCTATTAGATACGGCATGCGCCAGAGTTGCCATTAGCCAAAA
CGCTGAACCACCACAGTTGGAAAATTGCCGACATAAAATCGATGCCTTGAAGATTGAGCTAGAAATTGTTGAACGAGAAG
CAAAAATGGGGATAGGCGATCAGCAACGGTCAAATACCATCCTCAATGCGCTATCCCTATTGGAAGAACAACTTATTCAA
TTGGAAAACCGCTGGCAGCAAGAACTCTCCTTGATTAATAGAATTATTCATCTGCAAACTCAACTTTATGCCCCCTCCTT
TCATCAACAACAGCATAATGATCCCAATGCCCTGCATGAAGAGCTAATAGCATTGCAACAACAATTAAAAACGTTACAAG
GAGAGATCCCCCTTATCTTTGCTTCGGTAGACAGCAATGTTGTTTCCGCCGTTGTCTCAGACTGGACGGGGGTTCCTCTT
GGCCGCATGGTAAAAGACGAAATTAATGCGGTATTGCATTTGGTGGATACACTCAACCAACGTATTATCGGGCAGTACCA
TGCTTTAGAGTTGATCGCAAAACGGGTACGAACTTCACGGGCAAAATTGGATGATCCCAATAAACCGGTGGGGGTGTTTA
TGTTATGTGGCCCTTCCGGTGTCGGTAAGACCGAAACCGCGCTGGCATTGGCGGAAACGCTATATGGTGGCGAACAGAAT
CTTATCACCATTAATATGAGTGAATTTCAGGAAGCCCATACGGTATCCACCTTAAAAGGGGCACCACCGGGGTATGTGGG
TTATGGTGAAGGGGGAGTATTGACCGAAGCCGTGCGCCGGCGTCCCTACAGTGTGGTCTTACTGGATGAAATTGAAAAAG
CCCACTCTGATGTCCATGAGATTTTTTTTCAAGTCTTTGACAAGGGTTGGATGGAAGATGGTGAAGGCCGCCACATTGAT
TTTCGCAATACCATTATTATCCTGACATCCAATATTGGGGCTGATTTGGTGAGTTCGCTGTGTTTACAACAGGCTCCTCT
TCCAGATCCAGAAAAACTGAGTACCGCATTGCGAAAACCCTTACTGCACGTATTTCCTGCTGCCTTACTCGGACGTTTGA
TTGTCATTCCTTACTATCCATTGAGTGATAATGTGATGACAAGTATTGTTCACCTGCAATTGGCAAGGATCAAAAAACGT
TTACTGGAAAACCATGACATTGTAGCTACATTTGATGAACCCATGATTAAATATATCGTTGGCCGATGTACAGAAATCGA
ATCAGGTGGCCGTATGGTAGATGCTATCCTGACCAACTCCTTGCTGCCGCAGATCAGCCAGCTCTTGCTCTCTGCTAACG
CGAATGGTCAGCAATATCATCAATTACAAGTCTCTCTCGGACAAGGTGAGTTTCAGTTCCAGTTCATGGAATGA

Protein sequence :
MPEISRSVLFGKLNRVLFTSLENATTFCKLRSNPYVELVHWLHQLMQQQDCDLQSVIRYFALDEAKLAKDIITALDRLPR
GASAISDLSEHIDSAVERAWVYGSLKFGVDKIRTAHWLIGMLKTFNLYNTLKAISRQFEQVNADTLIDNFNAICGNSSEE
PENEPPSHHSQPTKPQSSDSALRQYGQNLTDLARHGDIDPVSGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAIIEGL
ALRIAANEVPPPLQNVQLWLLDIGMLQAGAGIKGEFESRLRRVIDEVQSSPLPIILFIDEIHTLIGAGGQQGTGDAANLL
KPVLARGQLRTLGATTWSEYKKYIEKDPALTRRFQVVQIHEPDEAKALLMLRSLVWTLEKHHRVLLLDEAVEAAIRLSHR
YIPARQLPDKAVALLDTACARVAISQNAEPPQLENCRHKIDALKIELEIVEREAKMGIGDQQRSNTILNALSLLEEQLIQ
LENRWQQELSLINRIIHLQTQLYAPSFHQQQHNDPNALHEELIALQQQLKTLQGEIPLIFASVDSNVVSAVVSDWTGVPL
GRMVKDEINAVLHLVDTLNQRIIGQYHALELIAKRVRTSRAKLDDPNKPVGVFMLCGPSGVGKTETALALAETLYGGEQN
LITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHSDVHEIFFQVFDKGWMEDGEGRHID
FRNTIIILTSNIGADLVSSLCLQQAPLPDPEKLSTALRKPLLHVFPAALLGRLIVIPYYPLSDNVMTSIVHLQLARIKKR
LLENHDIVATFDEPMIKYIVGRCTEIESGGRMVDAILTNSLLPQISQLLLSANANGQQYHQLQVSLGQGEFQFQFME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 54
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-115 46
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 7e-115 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_2096 YP_003467995.1 ClpA/B-type chaperone VFG2076 Protein 0.0 58
XBJ1_2096 YP_003467995.1 ClpA/B-type chaperone VFG2084 Protein 1e-134 45