Gene Information

Name : XBJ1_1878 (XBJ1_1878)
Accession : YP_003467782.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : insertion element IS1 1/2/3/5/6 protein insA (IS1a/IS1b/IS1c/IS1d)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 1830880 - 1831155 bp
Length : 276 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAAGATTGATGTAACTTGCCCCTCTTGTTCCGCAGTGAAAGGGATCCATCGCAATGGGTGCTCGCGTTCTGGTCA
CCAACGTTATCTTTGCCAATCCTGCCGTCACTCCTGGCAACTGGAGTTCACTTATGCCGCTTGTCGTCTTGGTACCCATA
AGCAAATCGTCGATATGGCTATGAATGGAACGGGATGTCGGGCGACAGCACGAGTGATGGGGATTGGCCTGAATACCGTA
CTTCGGCATTTAAAAAACTCAAACCCAAATCGGTAA

Protein sequence : 
MAKIDVTCPSCSAVKGIHRNGCSRSGHQRYLCQSCRHSWQLEFTYAACRLGTHKQIVDMAMNGTGCRATARVMGIGLNTV
LRHLKNSNPNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 4e-27 68
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 4e-27 68
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 6e-27 66
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 7e-27 66
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 3e-27 65
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 4e-27 65
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 3e-27 65
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 4e-27 65
insA AEZ06026.1 InsA Not tested AbaR24 Protein 3e-27 65
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 4e-27 65
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 1e-06 44
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 1e-06 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_1878 YP_003467782.1 insertion element IS1 1/2/3/5/6 protein insA (IS1a/IS1b/IS1c/IS1d) VFG1690 Protein 6e-07 44