Gene Information

Name : XBJ1_1872 (XBJ1_1872)
Accession : YP_003467776.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Unknown
Product : insertion element iso-IS1n protein insB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 1827555 - 1827920 bp
Length : 366 bp
Strand : +
Note : -

DNA sequence :
ATGGGGTCATTCATCAGTAACAAAAAACGGCAACGCTGGCTGTGGTACGCGTGGGAGCCTCGCTTGAAACGTATTGTCGC
TCACGCTTTTGGCGCTCGTAGCAAACAGACACTCAGGACGTTGCTGGAAAAGTTATCCGCTTTTGATGTGGCATTCTGGT
GCACCGATAATTTCGGGGCATATGACATATTGGCTGATGAGAAACATATCACCGGTAAACTTTATACTCAACGTATTGAA
CGAGAAAATCTGAACCTGCGTAACAGGCTAAAGCGACTCAATCGCAAGACGCTGGGTTATTCTAAGTCAGTTGAAATGCA
TGACAAGATCATTGGCACATTCATCGAACGTAAGTTCTATTATTGA

Protein sequence :
MGSFISNKKRQRWLWYAWEPRLKRIVAHAFGARSKQTLRTLLEKLSAFDVAFWCTDNFGAYDILADEKHITGKLYTQRIE
RENLNLRNRLKRLNRKTLGYSKSVEMHDKIIGTFIERKFYY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 1e-17 52
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 1e-17 51
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 8e-18 51
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 8e-18 51
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 8e-18 51
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 8e-18 51
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-17 51
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-17 51
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-17 51
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-17 51
Z1123 NP_286658.1 hypothetical protein Not tested TAI Protein 2e-11 41
Z1562 NP_287066.1 hypothetical protein Not tested TAI Protein 2e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_1872 YP_003467776.1 insertion element iso-IS1n protein insB VFG0612 Protein 2e-18 51