Gene Information

Name : XBJ1_1836 (XBJ1_1836)
Accession : YP_003467742.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1795915 - 1796748 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence :
ATGCAAACAGAACCCGACGTGTTAACAGATCACAACGAACTTATCCTTTCGACCAATATCGAACGTGTGGTCACTGGCCG
CGATGCCGCACTGAAACAGATAGAACAACTTATTCAGCAGCTTGATGCCATTTCACGGCTAACCTCAGAAATTGGCGGTG
GCACAGCGCAAGATTGGGCGATGAAGTCCGTGCACCGCTACGATAGCTGGCTGACTGAGAAGGTTGATAAAGCGATGCCT
GCCGTCACCCGCAATATTGACCGCAGTATCTGGTGCGATTTGATGCTGAAGTCCGGCATGATGGCCTTGATGGATGCACA
GGCTCGCGACCAGTGGCACAAGAACCTGGAGGAGGGCGACCTTCCTGCCATCAGCGAGGCGAATATCCTCAGTACTTTTG
AGCAGCTACATCTGAACAAAATGGATGTCTTTGAACGTGGCATCATCAACGTCTTCAAAGGCCTGTCGTGGGATTACAAA
ACCAATAGTCCCTGCAACTTCGGTAAGAAGATCATCATCAATAATCTGGTAAGTCACAATCGCTGGGGATTTAGTCTGAA
CTGGGGTTGGCGGCGGGATCAACTGGCGGACCTGGAGCGAATGCTGTTTCTGCTGGATGGTAAACCGATACCCGACAACC
GTGGCGATGTCACTACACGGTTGATGGAGCATATTCGGGACAACCCTTCGAAGGATGTCTACGAAGATGGTTTCTTCAGT
ATCCGTTATTTTCAGAAAGGAACCGCGCACATCACTTTTAAGCGGTGTGATCTGACAGAAAAGATGAATGATATTGTGGC
GAAGCACTATCCGGGGATGCTGGCAGCGAGATGA

Protein sequence :
MQTEPDVLTDHNELILSTNIERVVTGRDAALKQIEQLIQQLDAISRLTSEIGGGTAQDWAMKSVHRYDSWLTEKVDKAMP
AVTRNIDRSIWCDLMLKSGMMALMDAQARDQWHKNLEEGDLPAISEANILSTFEQLHLNKMDVFERGIINVFKGLSWDYK
TNSPCNFGKKIIINNLVSHNRWGFSLNWGWRRDQLADLERMLFLLDGKPIPDNRGDVTTRLMEHIRDNPSKDVYEDGFFS
IRYFQKGTAHITFKRCDLTEKMNDIVAKHYPGMLAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 3e-79 61
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-79 61
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-79 61
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 9e-80 60
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 8e-80 60
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 9e-80 60
unnamed AAL57572.1 unknown Not tested LEE Protein 1e-77 60
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 1e-77 60
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 1e-77 59
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-75 58
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-75 58
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-75 58
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 3e-76 57
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 2e-76 57
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 3e-70 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XBJ1_1836 YP_003467742.1 hypothetical protein VFG1533 Protein 2e-79 61
XBJ1_1836 YP_003467742.1 hypothetical protein VFG0666 Protein 6e-76 58
XBJ1_1836 YP_003467742.1 hypothetical protein VFG1685 Protein 1e-70 55