Gene Information

Name : phoB (XBJ1_1688)
Accession : YP_003467594.1
Strain : Xenorhabdus bovienii SS-2004
Genome accession: NC_013892
Putative virulence/resistance : Virulence
Product : response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family)
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1647727 - 1648416 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTAAACGCATTTTGGTAGTTGAAGATGAAGTCCAGATTCGTGAAATGGTTTGTTTGGTGTTGGAACAAAATGGCTA
TCAGACCGTTGAAGCAGAAGACTATGATGTTGCTGTCTGGCGCTTGTCGGAGCCTTATCCCGATTTGGTGTTATTGGATT
GGATGCTTCCCGGAGGTTCAGGAATACAGCTTATTAAGCAGATGAAGCGTGATAGCAGCACCAGAGATATTCCTGTCATG
ATGGTAACGGCTCGTGGAGAGGAGGAAGATCGCGTTCGTGGTCTTGATGTCGGAGCGGATGACTATATCACTAAGCCTTT
CTCTCCCAAGGAGTTGGTGGCTCGTATCAAAGCGGTTCTTCGTCGCGTTTCCCCCATGTCGGCGGAAGATATTATCAATA
TGGATGGGCTGATACTGGACTCTTCCTCCCATCGTGTTTCCAGTCAGGGGCAAAATGTGGAAATGGGGCCAACGGAATTC
AAGCTGCTCCATTTTTTCATGACGCATCCAGAGCGTGTTTATAGTCGTGAACAATTGCTCAATTATGTGTGGGGCACTAA
TGTTTATGTGGAAGATCGCACCGTTGATGTGCATATCCGGCGTTTGCGTAAGGCGTTAGAAGTAGGAGGGCACGATAGAA
TGGTGCAGACGGTCCGTGGTACAGGGTATCGCTTTTCTACTCGTTATTAA

Protein sequence : 
MAKRILVVEDEVQIREMVCLVLEQNGYQTVEAEDYDVAVWRLSEPYPDLVLLDWMLPGGSGIQLIKQMKRDSSTRDIPVM
MVTARGEEEDRVRGLDVGADDYITKPFSPKELVARIKAVLRRVSPMSAEDIINMDGLILDSSSHRVSSQGQNVEMGPTEF
KLLHFFMTHPERVYSREQLLNYVWGTNVYVEDRTVDVHIRRLRKALEVGGHDRMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-33 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_003467594.1 response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) AE015929.1.gene1106. Protein 2e-30 41
phoB YP_003467594.1 response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) NC_011595.7057856.p0 Protein 2e-34 41
phoB YP_003467594.1 response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) NC_010410.6002989.p0 Protein 2e-34 41
phoB YP_003467594.1 response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) NC_010400.5986590.p0 Protein 3e-36 41
phoB YP_003467594.1 response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) HE999704.1.gene2815. Protein 3e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_003467594.1 response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) VFG1563 Protein 7e-34 41
phoB YP_003467594.1 response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) VFG1702 Protein 9e-34 41